Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1664 |
Symbol | |
ID | 3972587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 1796391 |
End bp | 1797269 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637924779 |
Product | inner-membrane translocator |
Protein accession | YP_531544 |
Protein GI | 90423174 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCACTG CCACCATCAT CCAATCGCTC GCCAGCGGCC TGCTGATGGG CCTGTTGTAC GGCCTGATCG CCGCGGGTCT CGCGCTGATC TTCGGGCTGA TGGACGTGGT GAACTTCGCC CATGGCGAAT TCCTCATGAT CGCGATGTAC GTCACCTTCT TCCTGTTCGC GTTCTTCGCG ATCGACCCCC TGCTTGCCGC GCCGTTGGTC GCGGCGGCGT TGTTCGTGTT CGGCGCGGTG GTCTATCTCT TGGTGGTGAG GTTCGCGATG CGGGCCAAGG CCAACGTCGG CATGGTGCAG ATCTTCGCCA CCTTCGGGCT CGCGATCGTG ATGCGCGGCC TCGCCCAGTT CTTCTTCACG CCGGACTATC GCAGCATTCC GCATTCCTGG CTCGGCGGCC AGACCATCTC GCTCGGCGGC GTGTTCCTGC CGGTGCCGCA GCTGGTCGGC GCCGGGGTCT CGATCCTGGC GTTTACCGCG CTGTTCTTCT TCATCAAGAA GACCGACTTC GGCCGTGCGC TGGAGGCCAC CCGCGAGGAC GCCGGCGCGG TGGCGCTGGT CGGCATCGAC AAGAACCGGG TGTTCGCGCT GGGCTGGGGT CTCGGCGCGG CTCTGGTCGG CCTTGCCGGT GCGATCATGG CGATGTTCTT CTACATCTAT CCCGACGTCG GCGCCTCGTT CGCGCTGATC GCCTATGTCA CGGTGGCGCT CGGCGGCTTC GGCAGCGTGT TCGGCGCCTT CGCCGGCGGC ATCATCGTCG GCCTCGTCGA GGCTTCCACC GCGCTGTTGT TGCCGCCGTC GTTGAAATCG GTCGGCATCT ACGCGGTGTA CCTCCTGGTG GTGTTCATTC GGCCGCGCGG CCTGTTCGGA TCGATCTGA
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Protein sequence | MTTATIIQSL ASGLLMGLLY GLIAAGLALI FGLMDVVNFA HGEFLMIAMY VTFFLFAFFA IDPLLAAPLV AAALFVFGAV VYLLVVRFAM RAKANVGMVQ IFATFGLAIV MRGLAQFFFT PDYRSIPHSW LGGQTISLGG VFLPVPQLVG AGVSILAFTA LFFFIKKTDF GRALEATRED AGAVALVGID KNRVFALGWG LGAALVGLAG AIMAMFFYIY PDVGASFALI AYVTVALGGF GSVFGAFAGG IIVGLVEAST ALLLPPSLKS VGIYAVYLLV VFIRPRGLFG SI
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