Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1663 |
Symbol | |
ID | 3972586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 1795411 |
End bp | 1796391 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637924778 |
Product | inner-membrane translocator |
Protein accession | YP_531543 |
Protein GI | 90423173 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAACA GCTTCGCCCA ACGCCGACGT CGCGACCTGC TGCTCGCCGC CGGCTTCACC GCGGTGGCCG CCCTGGTTCC GTTATTCGTC AAGGACGTCT ACGTCCAGAA CATCATGGTG CTGACGCTGA TGTATGCGGC GCTGTCGCAG AGCTGGAACA TTCTCGGCGG CTATTGCGGC CAGATCTCGC TCGGCCACGC GCTGTATTTC GGCCTCGGCG CCTACACCAC CGCGCTGTTG TTCACCAAAT TCGGCGTGCT GCCGTGGTTC GGCATGATCA GCGGCGGACT GATCTCTGCA GTGATCGCGA TGGCGCTGGG CTATCCCTGC TTCCGGCTGC GCGGGCATTA CTTCGTCATC GCCACCATCG TGATCGCCGA GATCGCCTAT CTGTTGTTCC TGAACTGGGA CTGGGCCGGC GCAGCCCTGG GCATCGACAT CCCGGTACGC AAGGACTCCT GGACGACGTT CCAGTTCACC CGCAGCAAAC TGCCCTACTT CTACTTCGCG CTGGGGTTCT GCGTGGTCGC CTGGCTGGTC ACCTTCTGGC TGCAGGATTC CAAGTGGGGC TATTGGTGGC GCGCGGTGAA AGACAATCCC GACGCCGCCG AAAGCCTCGG CGTGGTGGTG TTCAATTCCA AGATGGGCGC CGCCGCGGTG TCGGCGTTCC TCACCGCGGT CGGCGGCAGC TTCTATGCGC AGTTCGTCTC CTACATCGAT CCGGAAAGCG TGATGAGCTT CCACTTCTCG CTGCTGATGG CGCTGCCGGC GGTGCTGGGC GGCATCGGCA CGCTGTGGGG ACCAGTGCTC GGCGCGGTGA TACTGATCCC GCTCACCGAA CTGACCCGCT CCTTCATCGG CGGCTCCGGC CGCGGCGTCG ACCTGATCGT CTATGGCACC TTGATCGTGC TGATCGCGCT GGCGCGGCCG GAAGGGCTGA TCGGATTGTT CTCGCGCAAA CGCAAGGGAG CCAGCCGATG A
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Protein sequence | MDNSFAQRRR RDLLLAAGFT AVAALVPLFV KDVYVQNIMV LTLMYAALSQ SWNILGGYCG QISLGHALYF GLGAYTTALL FTKFGVLPWF GMISGGLISA VIAMALGYPC FRLRGHYFVI ATIVIAEIAY LLFLNWDWAG AALGIDIPVR KDSWTTFQFT RSKLPYFYFA LGFCVVAWLV TFWLQDSKWG YWWRAVKDNP DAAESLGVVV FNSKMGAAAV SAFLTAVGGS FYAQFVSYID PESVMSFHFS LLMALPAVLG GIGTLWGPVL GAVILIPLTE LTRSFIGGSG RGVDLIVYGT LIVLIALARP EGLIGLFSRK RKGASR
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