| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1649 |
|---|
| Symbol | |
|---|
| ID | 3972883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 1781746 |
|---|
| End bp | 1782447 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637924765 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_531530 |
|---|
| Protein GI | 90423160 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.617035 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGT TGCGAATGAC GAGTGATTTG CGCCGGGAGT TGATCCTGAG CGCGGCGAAG
CGCTGTTTCG CCCGCCACGG CTTCGCCGGA ACCACCACCA AGAGCGTCGC GGCGGCGGCG
TCGATTTCCG AAGGATTGCT GTTCAAGCAT TTCCCGAGCA AATCGGCGCT TTATGCCGAA
ATCCTGGCGG AGGAATGCGA GGCGGCGCCG GCGATGCATG GCCTGCTCGG CCTGGAGCCG
TCGACGCAAA CCCTGGTCGT TCTGGTTCGC GGCATGGTGG CGCATTTTCT GCATGTCAGC
GAAGTGCCCG ACCAGGAAGA TGCCCAACGG TTAAGACTGA TGATGAGCAG TCAGCTGGAT
GACGGCGAAT TCGCGCGGCT TCTTTACCAG AAAGTAGGAG CTTTGATAGG ACCAGTGTTC
ACGGCTTCTC TCGATCGCGC GGTGCTGTCG GGCGAGGCAT CGCGGGTAGG GCGCGAGCCG
TTGAACCTGT TCTGGTTCGC CCACCACACC GTTTTGATGG CGGGGCTTTC GAGGTTGCCG
ACGACGCCGT GTCTCTCCTA CGACGACGCC ATCGATCTCG AGCGGCAGAT ATGTGAATTC
ATCCTGCGCG GCATTGGACT GAACGAAGCG GCGATCGCCG CGCATATGGA TCGTGACATG
CCGGTGAGCG AAACGCGACC GGCACCGGCA GAAAGTGCAT GA
|
|---|
| Protein sequence | MSTLRMTSDL RRELILSAAK RCFARHGFAG TTTKSVAAAA SISEGLLFKH FPSKSALYAE
ILAEECEAAP AMHGLLGLEP STQTLVVLVR GMVAHFLHVS EVPDQEDAQR LRLMMSSQLD
DGEFARLLYQ KVGALIGPVF TASLDRAVLS GEASRVGREP LNLFWFAHHT VLMAGLSRLP
TTPCLSYDDA IDLERQICEF ILRGIGLNEA AIAAHMDRDM PVSETRPAPA ESA
|
|---|
| |