| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1572 |
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| Symbol | |
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| ID | 3973130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1707136 |
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| End bp | 1708911 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637924688 |
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| Product | sodium/hydrogen exchanger |
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| Protein accession | YP_531453 |
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| Protein GI | 90423083 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.187931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00050527 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCGGCCG CAACCGATCT CGGGGTTTAT CGCGAAGCAT TGGTGTTTCT GGGCACGGCG
GGGGTTGTGA TCCCGCTGAT GGCACGGTTG CGCATCAGCC CGGTGCTCGG CTTCCTGGTC
GCGGGGCTGG TGCTCGGGCC GCATAGCCTC GGCGGGCTCG ACGAGACCTG GTCATGGCTC
GGCCTGATCG CCATCACCTC GCAGAGCGCG GTCGACCGCT TGGCCGAACT CGGGGTGGCG
TTTCTGTTGT TCAGCATCGG ATTGCAGCTG TCGTTCGACC GGCTGTGGAC GATGCGCCGG
CTGGTGTTCG GCTTCGGCAT GCTGCAGGTG GTGCTGACCA CCGCGGCGAT TGGCGCGGTG
ACTTTGGCGT TCGGCAACAC GCTCGATGCC AGCCTGGTGA TCGGCGCCTG CCTGGCGCTG
TCCTCCACCG CGATCGTGCT GCAATTGCTG GCCGAGCAGC GCCGGCTGTC GTCGGTCGCC
GGGCGCTCGA TCTTCGCCGT GCTGCTGGCG CAGGATCTGG CGGTGGTGCC GATCCTGTTC
CTGATCGTGG TGTTCGGCGG CGCCGTCGCC GAAGGCGGCG GGGGAAGCGT CACCGCCTCA
TCGGTCTCCG CCGGGCTCGC CCTGGCGCTG CTGCAGGCCG TCGGCGCGAT CGTGCTGATC
GTCGGCGTCG GCCGCTTGCT GTTGCGGCCG CTGTTCCGGC TGGTGGCGCG CACCCACAGC
CGCGAATTGT TCATGGCGAC GATCCTGTTC ATCGTGGTCG GCACCTCGCT GCTGACGCAT
TTCGCCGGGC TGTCGATGGC GCTCGGCGCC TTCCTCGCCG GCCTCTTGCT GTCGGAAACC
GAATTCCGCC GTCAGGTCGA GGTCGACATC GAGCCGTTCA AGGGCATGCT GCTCGGGCTG
TTCTTCATCT CGGTCGGGAT GCGGATCGAC CTTTCCGAAG TGTCGCGCAC GCCGCTGCTG
CTGGCTACCT CGGTGGTTGG CATGGCGGTG CTGAAGGCCT TGGTGATCGC GCTGCTGGCG
CGCGCCTTCA AACTGTCCTG GTCGGTCGCG CTCGAGGCCG GGCTGCTGCT CGCCGGCGGC
GGCGAATTCG CCTTCCTGGT GCTCGGCATG GCGGGCTCCA GCGGGCTCTT GAGGCCCGAC
GTCGAACAAT TCATGCTGCT GGTGGCGTCC GGCACCATGA TGCTGACGCC GTTTCTGGCC
CGGCTCGGCC GCCACGTCGG GGTGCAGGCG CGCCGCGCGG CGGCCATCAC CGACGGCTTC
GACGATCCCG GTCCGATCGA GCCCGGCCGC ACCATCGTGA TCGGCCATGG CCGGGTCGGC
CGCATCATCT GCGACATCCT AGCCAAGCAA GGCAAGCCGT TCATCGCCAT CGAGCGCGAC
CCCGACGTGG TGGCCAGAGG CCGCGAGATC GGCCGCAACC TGGTCTATGG CGACGCCACC
TCGCGCGCGT TCCTGCGCCA ATGCGGTCTC GCCGAGGCGC CCGCGGTGGT GGTGACGATG
CACGATCCGG CGGCCGCGGA AAACGCCGTG GCGGCGATCC GCGCCGACCG CGCCGACATT
CCGGTGATCG TGCGGGCCCG CGACGCCGCC CACGCGGTGC GGCTGTTCCA GCTCGGCGCC
AGCGAGGTGG TGCGCGAGGT GCTGGAGGCC AGCTTCGAAA TCGCCTCGAC GGTGCTGCAG
ACGTTGGGCC TGCCGATGGG CAAGGTGATC GCGATCATCC ACGACGAGCG CGACCTGCGC
AAAAAGCCGC TGCGCGAAGG CCGCGTGACG GATTGA
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| Protein sequence | MAAATDLGVY REALVFLGTA GVVIPLMARL RISPVLGFLV AGLVLGPHSL GGLDETWSWL
GLIAITSQSA VDRLAELGVA FLLFSIGLQL SFDRLWTMRR LVFGFGMLQV VLTTAAIGAV
TLAFGNTLDA SLVIGACLAL SSTAIVLQLL AEQRRLSSVA GRSIFAVLLA QDLAVVPILF
LIVVFGGAVA EGGGGSVTAS SVSAGLALAL LQAVGAIVLI VGVGRLLLRP LFRLVARTHS
RELFMATILF IVVGTSLLTH FAGLSMALGA FLAGLLLSET EFRRQVEVDI EPFKGMLLGL
FFISVGMRID LSEVSRTPLL LATSVVGMAV LKALVIALLA RAFKLSWSVA LEAGLLLAGG
GEFAFLVLGM AGSSGLLRPD VEQFMLLVAS GTMMLTPFLA RLGRHVGVQA RRAAAITDGF
DDPGPIEPGR TIVIGHGRVG RIICDILAKQ GKPFIAIERD PDVVARGREI GRNLVYGDAT
SRAFLRQCGL AEAPAVVVTM HDPAAAENAV AAIRADRADI PVIVRARDAA HAVRLFQLGA
SEVVREVLEA SFEIASTVLQ TLGLPMGKVI AIIHDERDLR KKPLREGRVT D
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