Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1570 |
Symbol | gcvT |
ID | 3973126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 1702672 |
End bp | 1703826 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637924686 |
Product | glycine cleavage system aminomethyltransferase T |
Protein accession | YP_531451 |
Protein GI | 90423081 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000466042 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATGCTGG CACAGAACGA TCAAACGGCC CCCCTGCAGC GGACCCCGCT GCACGCGCTG CACCTGTCGC TTGGCGGCAA GATGGTACCG TTTGCGGGCT ACGAGATGCC GGTGCAATAC CCCACCGGCG TGCTCAAGGA GCATCTCCAT ACCCGCGCCA AGGCCGGGCT GTTCGACGTC TCGCACATGG GACAGCTCGA ACTGCGGGCC AAATCCGGCC ATGTCGCCGA TGCCGCGCGG GCGCTGGAAC GGCTGGTGCC GCAGGATATT CTGGCGATCG CACCGGGGCG GCAGCGCTAC GCCCAGTTCA CCAATGAGCA AGGCGGCATT CTCGACGACC TGATGGTGGC GAATTCCGGC CGCCATCTGT TTCTGGTGGT GAACGCCGCC TGCAAGGCCG CCGACGAGGC GCATCTGCGC GATGGGCTGT CCGACGTCTG CGACATCGTC TCCCGGCCCG ACCGGGCGCT GCTGGCGCTG CAAGGCCCTC ACGCCGAAGC CGCGCTCAGC AGGCTCTGTA GCCAGGTCGA CACGTTGCGC TTCATGGACA CCGCCCCGCT CACCGTGATG GGGTTGGACT GCTTGGTGTC GCGCTCCGGC TACACCGGCG AGGACGGCTA TGAGATCTCG GTGCCGGCCG ACGGCGCCGT GGCGCTGGCC GAAGCGCTGC TCGACGATCC CGAGGTGCTG CCGATCGGAC TTGGCGCCCG CGACAGCCTG CGGCTCGAGG CCGGGCTCTG CCTTTACGGT CACGACATCG ACGCCAGCAC CACGCCGGTC GAAGCGGCGC TGGAGTGGTC AATCCAAAAA AGCCGCCGCA ACGGCGGCCC GCGGCCGGGC GGTTTTGCCG GCGCCGCGGT GATTTTGGAC CAATTGGAAA CCGGCGCGCC GCGCCGCCGC GTCGGACTGC GGCCGGACGG CCGCGCCCCG GTGCGCGAGG GCGCGCCGCT GTTCGGCGAC GACAGCGCCA CCGATTCGAT CGGCACGATC AGCTCGGGCG GGTTCGGGCC GAGCCTCGGC GGCCCGTTGG CGATGGGTTA TCTGCCGACG CCACAGGCTC GTCACGATGC CGTGATCTTT GCCGAACTGC GTGGCCAGCG GCTGCCGCTG CGGGTCTGCG CCACCCCTTT CATTCCGACC AGCTACAAGC GTTAA
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Protein sequence | MMLAQNDQTA PLQRTPLHAL HLSLGGKMVP FAGYEMPVQY PTGVLKEHLH TRAKAGLFDV SHMGQLELRA KSGHVADAAR ALERLVPQDI LAIAPGRQRY AQFTNEQGGI LDDLMVANSG RHLFLVVNAA CKAADEAHLR DGLSDVCDIV SRPDRALLAL QGPHAEAALS RLCSQVDTLR FMDTAPLTVM GLDCLVSRSG YTGEDGYEIS VPADGAVALA EALLDDPEVL PIGLGARDSL RLEAGLCLYG HDIDASTTPV EAALEWSIQK SRRNGGPRPG GFAGAAVILD QLETGAPRRR VGLRPDGRAP VREGAPLFGD DSATDSIGTI SSGGFGPSLG GPLAMGYLPT PQARHDAVIF AELRGQRLPL RVCATPFIPT SYKR
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