Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1566 |
Symbol | |
ID | 3973122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1696770 |
End bp | 1697543 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637924682 |
Product | hypothetical protein |
Protein accession | YP_531447 |
Protein GI | 90423077 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.4593 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000373513 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCTGCAG CCGCTGCGAT GATGCGGCTG CGGAGTTCGC GGGCGGCGGG GCCGTCGCGG TCACCAAGGA GCACAGCAGT TGCCCATTGC CGGCCGACGC GGTTTTCCTT GCACCACTTC GCGAGGGACG TTCCTTGGGC TACAAGAGCG CCACGAACTT GCTGCAAAAG CTCGGGAGAG GGAGGAAGTG CGTCCACGGA ATCACCTATG CAATCACAAT GCAATCATGA TTGCATTCCG CGAGCACGTC AAGAGATCAT GAGACCGTTC CCAGTTGATG CATTCATTGA TGCCGTGAAG GCTAAATGCG CCGTGACGTC AGATGACGAT CTCGCGGACA GAATTGGTAT AGGCAAAAGC ACAATCGCGT CGTGGCGACG TCGCAACAGT ATTCCGAAGC AGGTTCGGGA TGATCTATGC CGAATGTTCG ATATTGATTA CGCCGATTTT CTCAATCGGA TCGTCGCAGA GTGGCTGAAC GATTCTCACC CAGGCGATAC CATTTTACTT CTACTCGCGA TGCGCCTCAG CGACCGCCTC GACGAAGGGG CCTTTGTCGA ATGGTCGCAG TGGATTTCTA ACTGGCGCTT AGAAATTCTT GCCGAGATCG CGCGTGCCTC TGGCGGCTGG GATTGGGGGA AGGAGAGTTT GGTCGATAAA CTCTCGGACA TCCTTCTGAC CGTGACTGAC AAGGCTCGCT TCAATGCCGA CTATCTGATC AACCTGCGGG CAGACCTTGA GGCGCGGCCA GAGAATATCC CAGGCGAAGC TTGA
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Protein sequence | MPAAAAMMRL RSSRAAGPSR SPRSTAVAHC RPTRFSLHHF ARDVPWATRA PRTCCKSSGE GGSASTESPM QSQCNHDCIP RARQEIMRPF PVDAFIDAVK AKCAVTSDDD LADRIGIGKS TIASWRRRNS IPKQVRDDLC RMFDIDYADF LNRIVAEWLN DSHPGDTILL LLAMRLSDRL DEGAFVEWSQ WISNWRLEIL AEIARASGGW DWGKESLVDK LSDILLTVTD KARFNADYLI NLRADLEARP ENIPGEA
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