Gene RPC_1566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1566 
Symbol 
ID3973122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1696770 
End bp1697543 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content56% 
IMG OID637924682 
Producthypothetical protein 
Protein accessionYP_531447 
Protein GI90423077 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.4593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000373513 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCTGCAG CCGCTGCGAT GATGCGGCTG CGGAGTTCGC GGGCGGCGGG GCCGTCGCGG 
TCACCAAGGA GCACAGCAGT TGCCCATTGC CGGCCGACGC GGTTTTCCTT GCACCACTTC
GCGAGGGACG TTCCTTGGGC TACAAGAGCG CCACGAACTT GCTGCAAAAG CTCGGGAGAG
GGAGGAAGTG CGTCCACGGA ATCACCTATG CAATCACAAT GCAATCATGA TTGCATTCCG
CGAGCACGTC AAGAGATCAT GAGACCGTTC CCAGTTGATG CATTCATTGA TGCCGTGAAG
GCTAAATGCG CCGTGACGTC AGATGACGAT CTCGCGGACA GAATTGGTAT AGGCAAAAGC
ACAATCGCGT CGTGGCGACG TCGCAACAGT ATTCCGAAGC AGGTTCGGGA TGATCTATGC
CGAATGTTCG ATATTGATTA CGCCGATTTT CTCAATCGGA TCGTCGCAGA GTGGCTGAAC
GATTCTCACC CAGGCGATAC CATTTTACTT CTACTCGCGA TGCGCCTCAG CGACCGCCTC
GACGAAGGGG CCTTTGTCGA ATGGTCGCAG TGGATTTCTA ACTGGCGCTT AGAAATTCTT
GCCGAGATCG CGCGTGCCTC TGGCGGCTGG GATTGGGGGA AGGAGAGTTT GGTCGATAAA
CTCTCGGACA TCCTTCTGAC CGTGACTGAC AAGGCTCGCT TCAATGCCGA CTATCTGATC
AACCTGCGGG CAGACCTTGA GGCGCGGCCA GAGAATATCC CAGGCGAAGC TTGA
 
Protein sequence
MPAAAAMMRL RSSRAAGPSR SPRSTAVAHC RPTRFSLHHF ARDVPWATRA PRTCCKSSGE 
GGSASTESPM QSQCNHDCIP RARQEIMRPF PVDAFIDAVK AKCAVTSDDD LADRIGIGKS
TIASWRRRNS IPKQVRDDLC RMFDIDYADF LNRIVAEWLN DSHPGDTILL LLAMRLSDRL
DEGAFVEWSQ WISNWRLEIL AEIARASGGW DWGKESLVDK LSDILLTVTD KARFNADYLI
NLRADLEARP ENIPGEA