| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1520 |
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| Symbol | fliQ |
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| ID | 3971956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1656402 |
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| End bp | 1656665 |
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| Gene Length | 264 bp |
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| Protein Length | 87 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637924635 |
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| Product | flagellar biosynthesis protein FliQ |
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| Protein accession | YP_531401 |
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| Protein GI | 90423031 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1987] Flagellar biosynthesis pathway, component FliQ |
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| TIGRFAM ID | [TIGR01402] flagellar biosynthetic protein FliQ |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00598342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.364566 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGGCA TGGAAACCCT CGACGTCGCG CGCGACGCGA TCTGGACCAT CGTCATCGTG
TCGTCGCCGC TGATGGTGGT CGGCCTGGTG GTCGGCGTGG CGGTGTCGCT GGTGCAGGCG
CTGACCCAGA TCCAGGAACA GACCCTGGTT TTCGTGCCGA AAATCATCGC CATCTTCGTC
ACCTTGATCT TGGCGCTGCC GTTCATGGCC GACGCGATGC ACAGCCACAT GATGCGGATT
TCGTCGCGAA TCATGGGAGG CTAG
|
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| Protein sequence | MTGMETLDVA RDAIWTIVIV SSPLMVVGLV VGVAVSLVQA LTQIQEQTLV FVPKIIAIFV
TLILALPFMA DAMHSHMMRI SSRIMGG
|
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