Gene RPC_1505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1505 
SymbolflgA 
ID3972153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1641486 
End bp1642598 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content72% 
IMG OID637924620 
Productflagellar basal body P-ring biosynthesis protein FlgA 
Protein accessionYP_531386 
Protein GI90423016 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1261] Flagellar basal body P-ring biosynthesis protein 
TIGRFAM ID[TIGR03170] flagella basal body P-ring formation protein FlgA 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.563767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGCA CCTCCTCGCT GCTCATTGGC CTCGCCATCG CCCTCGCCGG CGCCGGCCCA 
GGCATCGCCC AAAGCCCAGC TCAAGGCCCA GCTCAGAGCC CTGGCCAGAG CCCAGCCCAG
TCCCCCGCCC AGAGCCGCGA CGACGTCATC GCGTCGCCGG TGCTGCGCGC CAGCGTCACC
GTGACCAGCG ACCTGGTGCT GATCGGCGAC GTCATCGACA ACGCCGGCAG CGCCGCCAAG
ATCGCGATCT ATCGCGCCCC CGATCTCGGC ACCACCGGGT CGCTGCCGAC CGCCAAGCTG
TTGGCGGCGC TGCGCGCGCA TCAGGTGATC GGCGTCGAGA CCCGCGATAT CCGCGAAGTG
AGCGTGACGC GGCTCGCCCG CACGGTGGCC AGCGAAGAGA TCGAAACCCA GGTGGCGCGC
GCGCTGGCGC AGAACAACGG CCGCGCCGAG CCCGGCAGCT TCCAGATCAA GTTCGACCGC
GATCCGCAGA CCCTGCAACT CGATCCTTCG AACAGCGGCG CGATGGAGCC GGTCGCGGTG
CGCCACGACG CGCGCAGCGG TCGGTTCGAC GTCACCTTCG AGATCGCCGG CGACGGCAGT
GCCGCGCCGA CCAAGCTGCG CTTCACCGGC ACCGCGATCG AGACCGTGGA CGCCGCGGTG
CTGGCGCGCG GCGTCGAGCG CAACGAGGTG CTGAAATCGT CCGACGTGGT GGTCGAGCGG
CGGCCGAAGG CCGAGATCGG CGGCGACGCC GCCAGCCGCG ACGACGCGGT CGGTATGCAG
GCGCGGCGGC AATTGCGCGC CGGCCAGGCG TTGCGGCTCG TCGACCTCAG CAAACCCGAT
CTGGTGTCGC GCGACCAGGC CGTCACCCTG ATCTACCAAT CGACCGGGCT GTATCTCACC
GTGCGCGGCA AGGCGCTCGA AAGCGGCACC GAGGGCGACG TCGTCAACGT GATCAACCTG
CAATCCAAGC GCACCGTCGC CGGCACGGTG ATCGGCCGCG GCCAGGTTGC CGTATCGGTC
GCCACGCCCC GCATCCTCGC CGCCGCCGCG CCGGCCGACG CCGCGACGCC GCGTTCCGGC
GCCGCCACCC CCGCCTCCCG CCAACCCGAG TAA
 
Protein sequence
MMRTSSLLIG LAIALAGAGP GIAQSPAQGP AQSPGQSPAQ SPAQSRDDVI ASPVLRASVT 
VTSDLVLIGD VIDNAGSAAK IAIYRAPDLG TTGSLPTAKL LAALRAHQVI GVETRDIREV
SVTRLARTVA SEEIETQVAR ALAQNNGRAE PGSFQIKFDR DPQTLQLDPS NSGAMEPVAV
RHDARSGRFD VTFEIAGDGS AAPTKLRFTG TAIETVDAAV LARGVERNEV LKSSDVVVER
RPKAEIGGDA ASRDDAVGMQ ARRQLRAGQA LRLVDLSKPD LVSRDQAVTL IYQSTGLYLT
VRGKALESGT EGDVVNVINL QSKRTVAGTV IGRGQVAVSV ATPRILAAAA PADAATPRSG
AATPASRQPE