Gene RPC_1455 details

Gene Information

• Locus tag: RPC_1455
• ID: 3973433
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris BisB18
• Kingdom: Bacteria
• Replicon accession: NC_007925
• Strand: -
• Start bp: 1582360
• End bp: 1588341
• Gene Length: 5982 bp
• Protein Length: 1993 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637924570
• Product: hypothetical protein
• Protein accession: YP_531336
• Protein GI: 90422966

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.529974
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCGAACA ATCCCAAGAA GGTCAAAGAT CCCACCGAAG TTGCGCTGTC TGCGATTCAG 
GAAGCCCTGA ACATCAGCGA CGCGCCCGCG GCCGGCGGCG AAGCGACCTC GGTCAGGAAT 
GACAGTTCGC CCCATGCCGC CGACGTCGAG GCCGGCGGCG GCTATGAGCC GCGCATCCCT 
GATCCGCGGC CCCCGACTTT CGACGAAGGC GAGGAGCAGC GGTTCACCCG CCGCGCCGCC 
AACGACGACC GCGAAACCAT CGGCCAATTG CTGCAAGCCA TTCAGAAGGG CCGCCCTGCC 
CGCAACGTCT ACACCCTGGC CTCGGTGTTC GCCGGCATCT GGCTGGTCGG CGCCGGCCTG 
TTGACCGTCG CCTTCCTGCC GGCGCTGCAG GCCTTCATCG GCCAGGGCAG CGGCGGCGTG 
CTGGTGTTGG CCGGATTGGC CGCCTTGTTC TTCGCCCCGG TGATGCTGTT CTATTTCCTC 
GCCAGCCTGG CCTGGCGCGG CCAGGAATTG CGGATGATCG CGCAGTCGAT GGCGCAGGTC 
GCGATCCGGT TTTCCGAGCC CGAGGGCGCC ACCAGCGATT CCATGGTGAC GGTCGGCCAA 
GCGATCCGCC GCGAGGTCGC GGCGATGGGC GACGGCGTCG AGCGCGCCAT CGCGCGCGCC 
GGCGAACTGG AAACCCTGGT CGCCAACGAG GTCTCGGCGC TGGAGCGCGC CTATTCCGAC 
AACGAAGTGC GGATCCGCGC ATTGTTGCAG GACATCGCGC ATCAGCGCGA CAACCTGGTC 
GGCCAGGCCG AGCAGGTGCG CAGCGCGATC TCCGGCGTGC AGATCGATCT GCGCCACGAC 
ATCGCGCTGA TCTCGGATGC GATCGCCTCG CGGGTCGACG AAGTCGCCAA GAGCATCACC 
GGCGCGCTGG AAGAGCGCGG CGCCCACATC ACCAACGCGC TGTCGACCGC CGGCGACCAC 
ATGATCCTCA CGCTCGGCGA GCGCGGCGGC GATCTGTTGG ACCGTTTCGA GGAAGCCAGT 
TCGGAGACCA CGCGCGCGGT GCTCGAGGCC AGCGAACGGC TCACCAACAG CCTGAATTTC 
AAGACCGGCC ACGTCCACAA CGAATTCGTC GAACTGGCCG ACCGCGTGCA CGACATGCTG 
AACGAGCGCA TCGATCGCAT CACCGGCGAA TTCGAACAGA AGTCGTCCTC GATCGTCGAC 
GGCATCTCCG AGCGCACCGA GCAGGTCCAC GATTCGCTGA AGAACTCCAG CGACTCGCTG 
TTGCTCGAGC TCGAATTGCG CAGCGGCGAT CTGGTCAGCA AGATCGACGA GGCCGGCAAC 
CGGCTGGCCA CCCAGGTTCT GACCAGCGGC GACAAGGCCA GCGAAGCGCT CGACGTCACC 
GTCAACACGC TGGTGGCCAA GGTCGTCAGC CAGACCGAGA ACGCGCACGA TACGCTCAGC 
ATGCAGATGA GCGCGTTCGA CGAACTGGTG AAGGACCAGG GCAGCGAACT CGCCGAGCGG 
TTCGCGCGCG ACAGCGGCAC GCTGGGTGCC TTGATCACCC GCCACATCTC CGAATTCGAC 
CGCACCGTCA AAACCTTCGG CGGCGACATC GTCGAGCGCA TGGGACAGCG CACCCAGGAG 
ATCTCGGAGA CGCTGAAGAC CTATGTCGAC ACCTTCGACA CAAGGCTGAC CTCCAACGGC 
GGCGCCATCA GCGCGGCGCT CGACAACCGT CTGTCGCAGT TCGAGACCAC CTTCGAAACC 
CGGGTGTCCG GCCTCGACGG CTCGCTCGAC AGCAAGATCA AGAGCTTCGA CGCCGCCGTC 
GATGGCCACC TGAAGTCGCT GGAATTGACC TTCGATACCC GCGCCAATTC GGTCATCGAA 
ACCATCGACA GCCGCATCGA AACCCTGAGT TCGTCGCTGA CCGACGGCGC CGCGCAGGCC 
GTTGAATCGA TCGACACCCG GCTCAGCCAG CTGACGCAGT CGCTCACCGA GGGCGCCGCC 
AACGCCGCCG AATCCATCGA CACGCGACTG AGCCATCTGA CGCAGTCGCT GACCGAAGGC 
GCCGCCAACG CCACCGACGC CGTCGACAGC CGGCTCAGCG AGCTCACCAA GACGCTGACC 
GAGCGCGCCG CCCACGCCAC CGACGCGATC GACAGCCGGC TCAGCCGGCT CACCACGTCG 
TTCACCGAGA GCGCCGCCGA CGCCACCGAC GCGATCGAAG GCCGCATCCA CCGGCTCACC 
GCCACATTCA CCGAGGGCTC CGCCACCGCC ACCGAGGCGA TCGACGCCCG GCTCGGCCGC 
CTCACCAGCG CGTTGACCGA CGGCGCCGCC AATGCGACGC AGGCGATCGA CATCCGGCTC 
AGCCATCTGA CGATGTCGCT GACCGACGGC GCCACCCAGG CGGTGCATTC GATCGACTCG 
CGGCTTGCCC ACCTCACCCA GTCGCTGACC GACGGCACCG CGCAGGCGGT CAGCGCCATC 
GACCAGCGCA TCGCCGACGT GACCGAGGCG ATCGATGGCC GCAGCAGTCA CCTCGCCGAC 
ATCGTCACCG CCCGCTTCCA GGAAATCCAC CAGGGGCTGG AGACCAGCGC CGGCGCCGTG 
GCCACCGACA TCGACATCCG CGTCACCCAG TTCGAGGATC TGCTGGGCTC GCGCGTCGAA 
GCCGTGGTCG GCCGGATCGA AAGCAGCGGC CGCAACGCCA GCGATAGTCT GATGGCCCGG 
GCCGAGGAAT TGTCGCTCGG CATCAAAGCC CATGTCGAGG ACGCCGAGCG CTCGCTCACG 
CATCTCGTGG TCAACACCAG CGAGACCATC CAGACCGGGG CACGCGCCGC GCAGGAATCG 
CTGCTCGCCG CATCCGCCGA GGTCGGCGCC CAGCTCAAGC TGACCTCGAG CGAGGTCGAG 
AACGCGCTGA CCGCCGTCGG CACCAACGCC GCGGGCTCGA TCGTCAGCAG CGCCCGCGAC 
GCCCAGGCGA CGCTGTTGGC GGCGTCTGCA GACGCCGCCG GCCAGGTCAG ATCGCTGGCC 
GCGGACGTCG AGCGCTCGCT CTCGACGGCG GGCAGTTCGA CCGCGACCGC GCTGCTCTCC 
GGCGCGCGCG AAGCCCAGAC CACGCTGGTG ACCACCTCCG CCGAGGTCGC CAACCAGATC 
CGTTCGCTGT CCGCCGATAT CGAACGCACG TTGTTTGCCG CCGGATCGGC CACCGCCGAT 
TCCGTGCTGA CCGGCGCCCG CGCCGCGCAG ACCGCGCTGG TCACGGCGTC GTCGGATGCC 
TCCGAGCACG TCAAGTCGCT TACCGCCGAC GTCGAACGCA CCTTGTCGAG CGCGGGATCG 
GCCACCGCCG AGACCATTCT CAACAGTGCG CGCGACGCGC AGAACGCCCT CGTCACCGCC 
TCCAGCGACG CCGCGAACCA CGTCAAGTCG TTGGCGATCG ATGTCGAACG CACGCTGTCG 
GCGGCCGGAT CGGCCACCGC CGACTCGATC CTCGGCAGCG CGCGTGAAGC CCAAGAGCGG 
CTGTTGAGCG CCTCGAGCGA TGTCTCGGGC CAAGTCAAAT CGCTGGCCGG CGACGTCGAG 
CGCACCTTGA CCGCGGTCGG CACCTCCACC GCCGCAGCCA TTCTGTCCGG CGCCCGGGAG 
GCGCAGAACA CCCTGGTCAG CGCCTCCACC GAGACGGCCG GCCAGGTCAG CGCTTTGGCC 
GAAGACGTCG AACGCAGGCT CTCGGCGGTC GGCATCGCCA CCGCCGAGGC GATCGTGGCC 
GGCGCTCGCG AGGCGCAGAC CAGCCTGGTG ACCGCGTCGG AAGATGCGAC CAACCACGTC 
AAGTCGCTGG CGATCGATGT CGAACGCACG CTGACCAAGG TCGGCGCCGA CACCGCGGCG 
TCGCTGCTGG GCAATGCCCG CGAGGTGCAG TCGACACTGG TCACGGTGAC GGCGGAGTCC 
GCCAGCCAGA TGAAGGCGAT CTCCGCCGAC ATCGAGCGCA ACCTGGCGAC GGTGACGGCG 
AACACCACCG ACACCATCCA GGCCAGTGCG GCCAACGCGC AGAACGCGCT GGTCGCCGCG 
TCGAACGAAG CCTCGACCAA GATCAAGACC ACCTCGGCCG AGATCGAACG CTCGGTGTTT 
GCCGCCAGCG GCAGCTTCGG CTCCACGATG ACCGGCAAGA CCGACGAACT CGTCAGCTAC 
GTGCAGCAGC AGACCGATCG GCTGGCGCAG ATGATCGACG GCAAGCGCGG CACGCTGGTC 
GACGCCATCG GCGGCCGGAC CAATCAGCTG ACGATCGACA TCGATCGGGT GACCAGCGAA 
GCGCTGAAGG CGATCGAAAG CCGCGGCAAG GCGTTCTCGA CCACCATCGT GACCAACAGC 
ACCGAGGTCG CACGCACCAT CAACGGCGCC AGCGAACTCG CCACCGGCGC GATCAGCAAG 
TCGCTGAAGG ACCTCGAACA GGCGTCGCGC ACCGCGATCG AACAGTCGCG TCAGGTCTCG 
ATCTCGGCGG TTACCGAAAT GCAGGAAACC AGCAAGATCC TGCGCACCGA CACGGTGGCG 
CTGTTCGAGC GCCTGCGCGA GGGCAACATC CTGCTACAGG AAGTGCTGAC CGGCGCCCAC 
GAGAACCTCA ACTCGCTGGA GCGCGCGCTG GTCACCCGGG TGGCGGACTT CGTCTCCACC 
ATGAACGACG TGAACTCGCA AAACGGCGTC GCCACCCAGG CGTTGGAAGA CCAGCTTACG 
GTGTTCAACA CCAAGACCAG CCGGGCGCTG GTCGATCTCG GCTCGCTGTC GGAACAGTTC 
GCGGCCCACG GCAATGCCCT GGTGGAAGCC GCGGCGCTGG TCGAGCAGAG CAACCGCGGC 
ACCACCGCTT CGGTCGCCGA GCGCAAGGGC GAATTGGAAT CGCTGATCAC CACCATCGAC 
CTGCGCACCG CCGATCTCGA TCAGCGGCTG AGCCGGTTCA CCGGGCTGTT GGATGAATCG 
CTGGCGGCGG CCGAAGAGCG CGCCCGCGAC ATCGCCCGCG TGGTGGCGGA AACCGCCGGC 
GCCGGTTCAG CGACGATCGC GCGGCAGTTC GAGGCGGTGC GCTCCTCCGC CGAACAGGAA 
CGCCGCCTGA CCTCCGAGGC GATGAGCGAA TTGTACCAAC AGGGCACTCG CGAAGCCGAC 
GCGATGTTCA AGCAGTCGGC CGACAAATTC TCCTCCATGG TTCAGAGCAT GAAGCAGATG 
GCGTCGGAAA TGCACAACGA GCTGGAATCG ACCCGCGAGG AACTGCGGCG CGGCGTGCTG 
GAAATTCCCC AGGAAGCCGC CGAGAGCACC GCGCAGATGC GCAAGGTGAT CGTCGATCAG 
ATCGAGGCGT TGGCCGAGTT GAACCGCATC GTCGCCCGCC ATGGCCGCGG CCTCGACGTG 
GTCAGCAGCG GCCGCAACGC CCAGCGCGAA GAAGAGCCGA TGCTGGCCGC CGCCGGCGGC 
CGCAACGAAG CGCCGCTGCG TCAGGCCCCG CGCGGTCGCG ACTCCAGCGC CGCCACCCTA 
CCGCCGCCGG ACCTCGGCCT GCCGTCCGCG CCGCGGCGCA CCGAAGCGCC GCCGGTGAGC 
CCCGCCGACG CCGATCAGGG CCGCGACGGC TGGCTGTCCG ACCTGCTGAA CCGCGCCGAC 
AACGGCAACG AGCGCGAAGC GCCGCGCAGC CGCACGCCGC AACCGGCGCC GCAAGCTGCC 
AGCGGCAACC CGCTCGACTC GCTGTCGCTC GACATCGGCC GGCTGCTCGA TCGCAACCTC 
GCCGCCGAGA TGTGGGATCG CTATCAGCGC GGCGAGGCCA AGGCCTTCAC CAAGCGGCTG 
TACACCCCGG CCGGCCAGAA GGCGTTCGAC GAAGTCGGCC GCAAATATCG CAGCGACCGC 
AACTTCAAGC AGACCGTCGA CCGCTACATC ACCGAGTTCG AGCGGCTGCT CGACGAGGTG 
GCGCGCGACG AGCGCGGACC GGCGGTGCTG CGCGGACATC TGGTCTCGGA AACCGGGCTG 
GTCTACACGC TGCTCGCCCA CGCTTCGGGG CGATTGGGAT AA 

 

Protein sequence

MANNPKKVKD PTEVALSAIQ EALNISDAPA AGGEATSVRN DSSPHAADVE AGGGYEPRIP 
DPRPPTFDEG EEQRFTRRAA NDDRETIGQL LQAIQKGRPA RNVYTLASVF AGIWLVGAGL 
LTVAFLPALQ AFIGQGSGGV LVLAGLAALF FAPVMLFYFL ASLAWRGQEL RMIAQSMAQV 
AIRFSEPEGA TSDSMVTVGQ AIRREVAAMG DGVERAIARA GELETLVANE VSALERAYSD 
NEVRIRALLQ DIAHQRDNLV GQAEQVRSAI SGVQIDLRHD IALISDAIAS RVDEVAKSIT 
GALEERGAHI TNALSTAGDH MILTLGERGG DLLDRFEEAS SETTRAVLEA SERLTNSLNF 
KTGHVHNEFV ELADRVHDML NERIDRITGE FEQKSSSIVD GISERTEQVH DSLKNSSDSL 
LLELELRSGD LVSKIDEAGN RLATQVLTSG DKASEALDVT VNTLVAKVVS QTENAHDTLS 
MQMSAFDELV KDQGSELAER FARDSGTLGA LITRHISEFD RTVKTFGGDI VERMGQRTQE 
ISETLKTYVD TFDTRLTSNG GAISAALDNR LSQFETTFET RVSGLDGSLD SKIKSFDAAV 
DGHLKSLELT FDTRANSVIE TIDSRIETLS SSLTDGAAQA VESIDTRLSQ LTQSLTEGAA 
NAAESIDTRL SHLTQSLTEG AANATDAVDS RLSELTKTLT ERAAHATDAI DSRLSRLTTS 
FTESAADATD AIEGRIHRLT ATFTEGSATA TEAIDARLGR LTSALTDGAA NATQAIDIRL 
SHLTMSLTDG ATQAVHSIDS RLAHLTQSLT DGTAQAVSAI DQRIADVTEA IDGRSSHLAD 
IVTARFQEIH QGLETSAGAV ATDIDIRVTQ FEDLLGSRVE AVVGRIESSG RNASDSLMAR 
AEELSLGIKA HVEDAERSLT HLVVNTSETI QTGARAAQES LLAASAEVGA QLKLTSSEVE 
NALTAVGTNA AGSIVSSARD AQATLLAASA DAAGQVRSLA ADVERSLSTA GSSTATALLS 
GAREAQTTLV TTSAEVANQI RSLSADIERT LFAAGSATAD SVLTGARAAQ TALVTASSDA 
SEHVKSLTAD VERTLSSAGS ATAETILNSA RDAQNALVTA SSDAANHVKS LAIDVERTLS 
AAGSATADSI LGSAREAQER LLSASSDVSG QVKSLAGDVE RTLTAVGTST AAAILSGARE 
AQNTLVSAST ETAGQVSALA EDVERRLSAV GIATAEAIVA GAREAQTSLV TASEDATNHV 
KSLAIDVERT LTKVGADTAA SLLGNAREVQ STLVTVTAES ASQMKAISAD IERNLATVTA 
NTTDTIQASA ANAQNALVAA SNEASTKIKT TSAEIERSVF AASGSFGSTM TGKTDELVSY 
VQQQTDRLAQ MIDGKRGTLV DAIGGRTNQL TIDIDRVTSE ALKAIESRGK AFSTTIVTNS 
TEVARTINGA SELATGAISK SLKDLEQASR TAIEQSRQVS ISAVTEMQET SKILRTDTVA 
LFERLREGNI LLQEVLTGAH ENLNSLERAL VTRVADFVST MNDVNSQNGV ATQALEDQLT 
VFNTKTSRAL VDLGSLSEQF AAHGNALVEA AALVEQSNRG TTASVAERKG ELESLITTID 
LRTADLDQRL SRFTGLLDES LAAAEERARD IARVVAETAG AGSATIARQF EAVRSSAEQE 
RRLTSEAMSE LYQQGTREAD AMFKQSADKF SSMVQSMKQM ASEMHNELES TREELRRGVL 
EIPQEAAEST AQMRKVIVDQ IEALAELNRI VARHGRGLDV VSSGRNAQRE EEPMLAAAGG 
RNEAPLRQAP RGRDSSAATL PPPDLGLPSA PRRTEAPPVS PADADQGRDG WLSDLLNRAD 
NGNEREAPRS RTPQPAPQAA SGNPLDSLSL DIGRLLDRNL AAEMWDRYQR GEAKAFTKRL 
YTPAGQKAFD EVGRKYRSDR NFKQTVDRYI TEFERLLDEV ARDERGPAVL RGHLVSETGL 
VYTLLAHASG RLG