Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1409 |
Symbol | |
ID | 3973060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 1536193 |
End bp | 1537146 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637924524 |
Product | ribose-phosphate pyrophosphokinase |
Protein accession | YP_531290 |
Protein GI | 90422920 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.70704 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.419031 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGGCA AGAACGGCTC GATCAAGCTG GTGGCCGGCA ATTCCAATCG CGCGCTGGCG CAGGAAATTT CCAACTGGCT CGGCCTGCCG CTGACCAAGG CCGTGGTGCG GCGCTTCGCC GACATGGAAA TCTTCGTCGA GATCCAGGAA AACGTCCGCG GCTCCGACGT CTTCGTGATC CAGTCGACCT CGTTTCCGGC CAACGACCAT CTGATGGAAC TGTTGATCAT CACCGATGCG CTGCGCCGGG CTTCCGCGCG CCGCATCACC GCGGTGATCC CGTATTTCGG CTACGCCCGG CAGGACCGCA AGGCCGGCCC GCGCACCCCG ATTTCCGCCA AGCTGGTCGC CAACCTGATC ACCCACGCCG GCGCCGACCG GGTGATGACG CTCGACCTGC ACGCCGGCCA GATCCAGGGC TTCTTCGATA TCCCGACCGA CAATCTCTAC GCCTCGCCGG TGATGGTGCG CGATATCCGC GATCGCTTCG ACCTCGGCAA GGTGATGGTG GTGTCGCCCG ACGTCGGCGG CGTGGTGCGC GCCCGCGGCC TCGCCAAGCG CATCAACGCG CCGCTAGCGA TCATCGACAA GCGCCGCGAA CGCGCCGGCG AATCCGAAGT GATGAACGTG ATCGGCGAAG TCGAGGGCTA CACCTGTATC CTGGTCGACG ACATCGTCGA CTCCGGCGGC ACGCTGGTGA ATGCCGCCGA CGCGCTGCTC GCCAACGGCG CGGTCGAAGT CTACGCCTAC ATCACCCATG GCGTGTTGTC CGGCGGCGCC GCGACGCGGA TCATCGGCTC CAAGCTGAAA GAGCTGGTGA TCACCGATTC GATCCAGCCC ACCGAAGCGG TGCGCACCAC CACCAACATC CGCACGCTGT CGATCGCCTC GCTGATCGCC GAAGCGATCG GCCGCACCGC GTCCGAAGAG TCGGTGTCGA GCCTGTTCGA CTAA
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Protein sequence | MSGKNGSIKL VAGNSNRALA QEISNWLGLP LTKAVVRRFA DMEIFVEIQE NVRGSDVFVI QSTSFPANDH LMELLIITDA LRRASARRIT AVIPYFGYAR QDRKAGPRTP ISAKLVANLI THAGADRVMT LDLHAGQIQG FFDIPTDNLY ASPVMVRDIR DRFDLGKVMV VSPDVGGVVR ARGLAKRINA PLAIIDKRRE RAGESEVMNV IGEVEGYTCI LVDDIVDSGG TLVNAADALL ANGAVEVYAY ITHGVLSGGA ATRIIGSKLK ELVITDSIQP TEAVRTTTNI RTLSIASLIA EAIGRTASEE SVSSLFD
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