| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1406 |
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| Symbol | |
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| ID | 3973057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1533276 |
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| End bp | 1534076 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637924521 |
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| Product | pyrroline-5-carboxylate reductase |
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| Protein accession | YP_531287 |
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| Protein GI | 162136033 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
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| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.257606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGCA CCATCGTGCT GGCCGGCGCC GGCAAGATGG GCGGCGCGCT GCTGACCGGC
TGGCTGGCGC AGGGGCTGGA CGGCTGCAAC GTCGCGGTGC TCGAACCGCA TCCGTCCGAC
GAGATCGCAG CGCTCACTGC CCGCGGCGTG CGCTTCAACA CCTCGGCGCA GGATCTCGGC
GCGGTGGCCG CGCTGGTGAT CGCGGTAAAG CCGCAGATGT TTCGCGACGC CGCCGCCAAA
CTGAAAACCT TTGTCGGACC CGGCACGCTG GTGGTGTCGA TCATGGCCGG GGTGACCACC
GCGGCGATCG CCAAAGCCTG CGGCGGCAGC GTGGTGCGGG CGATGCCCAA TACCCCGGCG
GCGATCGGCC GTGGCATCAC CGTCGCGGTG CCGGGCCATC ACGTCAATGC CGAGCAGCGT
GCCACCGCCG ACGCGCTGTT GCGCGCCACC GGGGCGGTCG AATGGGTCGA CGACGAGTCC
CTGATTGACG CAGTGACCGC GGTATCGGGC TCCGGACCGG CCTATGTGTT CCTGCTCGCC
GAGGAACTGG CCCGCGCCGG CGTCGAAGCC GGACTGCCGG AACAATTGGC GACCAAGCTC
GCCCGCGCCA CCGTGGCGGG CTCCGGCGAA TTGCTGCATC GCTCCGAACT CGACGCCGCG
ACCCTGCGCA AGAACGTCAC GTCGCCGGGC GGCACCACCG CGGCCGCACT CGACGTGCTG
ATGGCAGCGG ATGGCTTTCA GCCGCTGCTC AGCCGCGCGG TGGCGGCGGC CAAGCGCCGC
TCGCAGGAAC TGGCGAAGTA A
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| Protein sequence | MTGTIVLAGA GKMGGALLTG WLAQGLDGCN VAVLEPHPSD EIAALTARGV RFNTSAQDLG
AVAALVIAVK PQMFRDAAAK LKTFVGPGTL VVSIMAGVTT AAIAKACGGS VVRAMPNTPA
AIGRGITVAV PGHHVNAEQR ATADALLRAT GAVEWVDDES LIDAVTAVSG SGPAYVFLLA
EELARAGVEA GLPEQLATKL ARATVAGSGE LLHRSELDAA TLRKNVTSPG GTTAAALDVL
MAADGFQPLL SRAVAAAKRR SQELAK
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