Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1378 |
Symbol | |
ID | 3972474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 1502802 |
End bp | 1504244 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637924493 |
Product | XRE family transcriptional regulator |
Protein accession | YP_531259 |
Protein GI | 90422889 |
COG category | [R] General function prediction only |
COG ID | [COG3800] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.151662 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.880216 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGGAG ACTCTGGAAA AAAGCTGTTC GTCGGCCCCA GGTTCCGGCG GATCCGTCAG CAACTCGGCC TGTCGCAGAC CCAGATGGCC GAGGGCCTCG GCATTTCTCC AAGTTATATC AACCTGATAG AGCGTAACCA GCGGCCCGTG ACGGCGCAGA TCCTGCTCCG GCTGGCGGAG ACCTATGACC TCGACCTGAG GGATCTGGCT ACCGCCGACG AGGACAGGTT CTTCGCCGAG CTGAACGAGA TTTTCTCCGA CCCGCTGTTC CGGCAGATCG ACCTGCCGAA GCAGGAACTG CGGGATTTGG CCGAACTCTG CCCCGGGGTG ACACATTCGT TACAACGGCT GTACGCCGCC TATACCGAAG CGCGGCGCGG CGAAACGCTG GCGGCGCAGA TGGCCGACCG CGAGGAAGGC ACAAGGTTCG AGGCCAACCC GATCGAGCGG GTCCGCGACC TGATCGAGGC CAACCGCAAC TACTTCCCGG AAATCGAGCA GGCCGCGGAA AACCTGCGCG ACGAACTCAA CGTCCCGGCG CAGGACCTGT TCGTGTCGTT GAGCGAGCGG CTGCGCGAAC AGCATTCCAT CGTCACCCGG ATCATGCCGG TCGAGGTGAT GCGCGAGACG CTGCGCCGCT TCGACCGCCA CCGCCGGCAA TTGCTGATCT CCGAACTGAT CGACGGCCCC GGCCGCGCCT TCCAGATCGC GTTCCAGATC GGCATCACCG AATTCGGCAA GACCTTCGAC GCCATCGTCA ATCGCGCCGG AGCAGTCGAC GACACCGCGC GGCGGCTGTA CCGCATCACC CTCGCCAACT ACTTCGCAGC CTCCGTGATG ATGCCCTACG GCGCGTTCCA CGCCGCCGCC GAGACCTTGA ACTACGACGT CCACGTGCTG GCGCAGCGCT TCAACGCCGG CTTCGAACAG GTCTGCCACC GGCTGACCAC GCTGCAGCGG CCGAACGCCC GCGGCGTGCC GTTCTTCCTG CTGCGGGTCG ACAACGCCGG CAACGTCTCC AAGCGGTTTT CCTCCGGCAC CTTCCCGTTC TCGAAATTCG GCGGCACCTG CCCGCTATGG ACCGTGCACT CCACCTTTGA CACCCCGGAC CGGCTGTTGA AGCAGGTGAT CGAACTGCCC GACGGCAGCC GCTACTTCTC GATCGCCCAA ATGGTGCGCC GCCCGGTGAT GCCGCATCCG CAGCCGCAGC CGCGCTTCGC CATCGGGCTC GGCTGCGAAA TCCGCCATGC CGCGAAGCTG GTCTATGCCG CGGGGATGGA TCTCGACAAG GAGGAAGCCA CCCCGATCGG GGTGAACTGC CGGCTGTGCG AGCGCGAGCA TTGCAGCCAG CGCGCCGAGC CGCCGATCAC CCGGAGCCTG ATCCTGGATG AGAATACCCG GCGGGCGTCG AGCTTTGCGT TCAGCAATGC GCGGGAGTTG TGA
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Protein sequence | MAGDSGKKLF VGPRFRRIRQ QLGLSQTQMA EGLGISPSYI NLIERNQRPV TAQILLRLAE TYDLDLRDLA TADEDRFFAE LNEIFSDPLF RQIDLPKQEL RDLAELCPGV THSLQRLYAA YTEARRGETL AAQMADREEG TRFEANPIER VRDLIEANRN YFPEIEQAAE NLRDELNVPA QDLFVSLSER LREQHSIVTR IMPVEVMRET LRRFDRHRRQ LLISELIDGP GRAFQIAFQI GITEFGKTFD AIVNRAGAVD DTARRLYRIT LANYFAASVM MPYGAFHAAA ETLNYDVHVL AQRFNAGFEQ VCHRLTTLQR PNARGVPFFL LRVDNAGNVS KRFSSGTFPF SKFGGTCPLW TVHSTFDTPD RLLKQVIELP DGSRYFSIAQ MVRRPVMPHP QPQPRFAIGL GCEIRHAAKL VYAAGMDLDK EEATPIGVNC RLCEREHCSQ RAEPPITRSL ILDENTRRAS SFAFSNAREL
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