| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1375 |
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| Symbol | |
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| ID | 3972471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1500598 |
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| End bp | 1501836 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637924490 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_531256 |
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| Protein GI | 90422886 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.399813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATTG CGCGTACTCT GACGTTGCTC ACCGCTTTGT CCCTCGGCTC CCCCGCTTTC
GCCGCGTCGG GTGCCGCCTG CCATGGCGGG CAAAGTTTCG AGCAATTCCT CGCCTCCCTG
AAACAGCAGG CCGCCGCCGA TGGCGTCTCG CCGCGGGCGA TCGCCGCCGC CTCGCCCGGC
CTGGTCTATG ACCAGGGCAT CGTCAATCGC GACCGCGGGC AAAGGGTGTT CGGCCAGGTG
TTCACCGAAT TCGCCGGCCG GATGGCGGCG AATTACCGGA TGCAGCAGGG CCAGGCGATG
ATCAAGACCC ATGCCCGCGC CTTCGCGCGC GCCGAGCAGG ACTACGGCGT GCCGCCGGCG
GTGATCGCGG CGTTCTGGGG ACTGGAGAGC GACTTCGGCG CCAACATGGG CAAGCTGCCG
ACGCTGCGCT CGCTGGTGTC GCTGGCCTAT GACTGCCGCC GCGCCAAGAT GTTCGAGGCC
GAGACCATCG CCGCTTTGAA GATCATCGAC CGCGGCGATC TTGCGCCCTC CGAGATGATC
GGCTCCTGGG CCGGCGAACT CGGCCAGACC CAGTTTCTGC CGACGCATTA TTTCAACTAC
GCGGTGGATT ACGACGGCGA CGGCCGCCGC GACATGCTGC GCAGCCCGGC CGACGTGATC
GGCTCCACCG CCAACTACAT CGCCAACGGT TTGAAGTGGC GGCGCGGCGA GCCGTGGCTG
CAGGAGGTGC GGGTCTCCGG CAATGTTCCT TGGGATCAGG CCGATCTGAC CATCCGGCAT
CCGCGCGCGC AATGGGCGCA ATGGGGCGTC GCTTATGCCG ACGGAAGGCC GCTGCCGAAC
GACAATATGC CGGCGTCGCT GCTGCTGCCG ATGGGCCGCA ATGGCCCGGC GTTTCTCGCC
TACGCCAATT TCGCCGCCTA CACCGAATGG AACAACTCGC TGATCTATTC CACCACGGCG
GGCTACCTCG CCACGCGCAT TGCCGGTGCG GCGCCGATGC GGCGCCCCGC GGCGCCGGTC
GCGCAATTGT CGTTCAACGA GCTGCGCGAG CTGCAGCAAT TGCTGGTGCG CGCCGGCTTC
AACGTCGGCA AGGTCGACGG CGTGATGGGG CAGCTTAGCC GCAGCGCGGT GAAGGCGATG
CAGGTCAAAT ACGGCCTGCC GGCGGATTCC TGGCCGACCG CCGAGCTGTT GGCGCGGCTG
CGCGGCGGCC CGCGGCCGAA TTTCACCCAG CAGAATTAA
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| Protein sequence | MTIARTLTLL TALSLGSPAF AASGAACHGG QSFEQFLASL KQQAAADGVS PRAIAAASPG
LVYDQGIVNR DRGQRVFGQV FTEFAGRMAA NYRMQQGQAM IKTHARAFAR AEQDYGVPPA
VIAAFWGLES DFGANMGKLP TLRSLVSLAY DCRRAKMFEA ETIAALKIID RGDLAPSEMI
GSWAGELGQT QFLPTHYFNY AVDYDGDGRR DMLRSPADVI GSTANYIANG LKWRRGEPWL
QEVRVSGNVP WDQADLTIRH PRAQWAQWGV AYADGRPLPN DNMPASLLLP MGRNGPAFLA
YANFAAYTEW NNSLIYSTTA GYLATRIAGA APMRRPAAPV AQLSFNELRE LQQLLVRAGF
NVGKVDGVMG QLSRSAVKAM QVKYGLPADS WPTAELLARL RGGPRPNFTQ QN
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