Gene RPC_1344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1344 
Symbol 
ID3972633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1466235 
End bp1466633 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content66% 
IMG OID637924459 
ProductPilT protein-like 
Protein accessionYP_531225 
Protein GI90422855 
COG category[S] Function unknown 
COG ID[COG3742] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGATCG ACACGTCCGC GATCGTGGCG ATTGCGCTCA ATGAGGCCGA TGCCTCGGAC 
ATCGAGATAC GGATTGCCGA TGACCCGGTT CGGCTGATCT CCGCGGCAAC CGTCGTCGAA
GCGACGATGG TGCTGGAGAC GCGGCTGGGT GAGACGGGCG GGCGCGAGTT CGACCTTCGG
CTGCTCAAGA TCGGCGCGGA GATCGTCGCT GGCGACGCCG AACAGGCCGA TGCGGCGCGG
CGCGCCTGGC GGCGCTACGG CAAGGGGCAT CACGCCGCCG CGCTGAACTA CGGCGACTGC
TTTTCCTACG CGCTGGCGGT GACGCGCGGC GAGCCGCTGT TGTTCAAGGG CGAGGACTTT
GCACAGACCG ACATCAATCG ACGCAGTGCG GAGCAATAG
 
Protein sequence
MVIDTSAIVA IALNEADASD IEIRIADDPV RLISAATVVE ATMVLETRLG ETGGREFDLR 
LLKIGAEIVA GDAEQADAAR RAWRRYGKGH HAAALNYGDC FSYALAVTRG EPLLFKGEDF
AQTDINRRSA EQ