| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1333 |
|---|
| Symbol | |
|---|
| ID | 3974072 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 1451059 |
|---|
| End bp | 1451691 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637924443 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_531214 |
|---|
| Protein GI | 90422844 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1704] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.58782 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACGAC TGTTGACGAT GCTGGCGGCG CTGGCGACCC TGAGCCTGAC CAATTGCGGC
TACAACACCA TCCAGAGCAA TGACCAGGAG GTCAAATCGA CCTGGTCGGA GGTGGTCAAC
CAGTATCAGC GCCGCGCCGA TCTGGTGCCC AATCTGGTCA ATTCGGTGAA GGGGTTCGCG
CAACAGGAAA AGGACGTGTT GCTCGGCGTC ACCAACGCCC GCGCCAAGGT CGGCAGCATC
CAGGCGACGC CGGAGGTCTT GAACGATCCC GCCGCGTTCC AGAAATTCCA GGCCGCGCAG
GGCGAACTGT CCGGCGCACT GTCGCGGCTG TTGGTGGTGA CCGAAAACTA TCCGCAGCTG
AAATCCGACG CGCTGTTTCG CGACCTGATG GCGCAGCTCG AGGGCACCGA AAACCGCATC
ACCGTGGCGC GCAACCGCTA CATCAAGGCG GTGCAAGAGT ACAACGTCAC GGTGCGCTCG
GTGCCGACCA ACTTCACCGC GATGCTGTTC GGCTACAAGG AAAAGCCGAA CTTCACCGTC
GCCAACGAGA ACGAAATCTC CACCGCCCCG AAGGTCGATT TCAATCCGCC GCCGGCGCCG
GCGCCGGCAC CCGCCCCAGT GCCGGCGAAG TAG
|
|---|
| Protein sequence | MRRLLTMLAA LATLSLTNCG YNTIQSNDQE VKSTWSEVVN QYQRRADLVP NLVNSVKGFA
QQEKDVLLGV TNARAKVGSI QATPEVLNDP AAFQKFQAAQ GELSGALSRL LVVTENYPQL
KSDALFRDLM AQLEGTENRI TVARNRYIKA VQEYNVTVRS VPTNFTAMLF GYKEKPNFTV
ANENEISTAP KVDFNPPPAP APAPAPVPAK
|
|---|
| |