Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1327 |
Symbol | rbcL |
ID | 3974066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1443486 |
End bp | 1445057 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637924437 |
Product | ribulose bisophosphate carboxylase |
Protein accession | YP_531208 |
Protein GI | 90422838 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.180974 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.453958 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGGTCAA TCTCCTCCCA ACCCACCCCG CTGGATTTTG CACCGCGCCC GCCGCCATCA CGGCCGCTCG GACCCGATCC GCGGACCGCC GAGAACGCCA AAGAGGAGAG CGCCATGAAC GAGTCAGTCA CGATACGTGG CAAGGATCGC TACAAGTCCG GGGTGATGGA ATACAAGAAA ATGGGCTATT GGGAGCCCGA CTACGAGCCG AAGGACACCG ACATCATCGC GTTGTTCCGG GTCACGCCGC AGGACGGGGT CGACCCGACC GAGGCGTCCG CCGCGGTGGC CGGCGAATCC TCGACCGCGA CCTGGACCGT GGTGTGGACC GATCGGTTGA CGGCCGCGGA AAAATACCGC GCCAAATGTT ATCGCGTCGA TCCGGTGCCG AATTCGCCCG GCCAGTTTTT CGCCTACATC GCCTACGATC TCGACCTGTT CGAGAACGGC TCGATCGCCA ACCTGTCCGC CTCGATCATC GGCAACGTGT TCGGCTTCAA GCCTTTGAAG GCGCTGCGGC TGGAAGACAT GCGGCTGCCG GTGGCTTACG TGAAGACCTT CCAGGGCCCG GCGACCGGCA TCGTGGTCGA GCGCGAGCGG ATGGACAAGT TCGGCCGCCC GCTGCTCGGC GCCACCGTGA AGCCGAAGCT CGGCTTGAGC GGCCGCAATT ACGGCCGCGT GGTCTATGAG GCGCTGAAGG GCGGGCTCGA CTTCACCAAG GACGACGAGA ACATCAACTC GCAGCCGTTC ATGCATTGGC GCGAGCGCTT CCTGTATTGC ATGGAAGCCG TCAACAAGGC GCAGGCCGCG TCCGGCGAGA TCAAGGGCAC CTATCTCAAC GTCACCGCCG GCACCATGGA GGAGATGTAC GAACGCGCCG AATTCGCCAA ACAGCTCGGT TCGGTGATCA TCATGATCGA CCTGGTGATC GGCTACACTG CGATCCAATC GATGGCGAAA TGGGCGCGCC GCAACGACAT GATCCTGCAT TTGCACCGCG CCGGGCACTC GACCTATACG CGGCAGCGCA ATCACGGCGT CTCGTTCCGC GTCATCGCCA AATGGATGCG GCTCGCCGGC GTCGATCACA TCCACGCCGG CACCGTGGTC GGCAAGCTGG AGGGGGATCC GGCGACCACC AAAGGCTACT ACGACATCTG CCGCGAGGAC TACAACCCGA TGCAGCTTGA GCACGGCATT TTCTTCGAGC AGAACTGGGC GAGCCTCAAC AAGCTGATGC CGGTCGCCTC GGGCGGTATC CACGCCGGCC AGATGCATCA ATTGCTCGAC CACCTCGGCG AGGATGTGGT GCTGCAGTTC GGCGGCGGCA CCATCGGCCA TCCGATGGGC ATCCAGGCCG GCGCCACCGC CAACCGCGTT GCCTTGGAAG CGATGATCAT GGCCCGCAAC GAAGGCCGCG ATTATCTGCA CGAAGGCGAG GAAATTCTCG CCAAGGCAGC GCTGACCTGC ACGCCGCTGA AGGCGGCGCT GGAGACCTGG AAGAACGTCA CCTTCAACTA CGAATCCACC GACATGCCCG ACTACGCGCC CACCCCCAGC GTCTCGATGT AA
|
Protein sequence | MGSISSQPTP LDFAPRPPPS RPLGPDPRTA ENAKEESAMN ESVTIRGKDR YKSGVMEYKK MGYWEPDYEP KDTDIIALFR VTPQDGVDPT EASAAVAGES STATWTVVWT DRLTAAEKYR AKCYRVDPVP NSPGQFFAYI AYDLDLFENG SIANLSASII GNVFGFKPLK ALRLEDMRLP VAYVKTFQGP ATGIVVERER MDKFGRPLLG ATVKPKLGLS GRNYGRVVYE ALKGGLDFTK DDENINSQPF MHWRERFLYC MEAVNKAQAA SGEIKGTYLN VTAGTMEEMY ERAEFAKQLG SVIIMIDLVI GYTAIQSMAK WARRNDMILH LHRAGHSTYT RQRNHGVSFR VIAKWMRLAG VDHIHAGTVV GKLEGDPATT KGYYDICRED YNPMQLEHGI FFEQNWASLN KLMPVASGGI HAGQMHQLLD HLGEDVVLQF GGGTIGHPMG IQAGATANRV ALEAMIMARN EGRDYLHEGE EILAKAALTC TPLKAALETW KNVTFNYEST DMPDYAPTPS VSM
|
| |