Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1300 |
Symbol | |
ID | 3972502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1413419 |
End bp | 1414339 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637924410 |
Product | photosynthetic reaction center subunit M |
Protein accession | YP_531181 |
Protein GI | 90422811 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01115] photosynthetic reaction center M subunit [TIGR01157] photosynthetic reaction center L subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTATC AGAATATTTT CTCACAAGTG CAGGTGCAGA GCGCCGCACA CCATGGGGTA CCCTTACGGC CCGGGAGTTC GGCCCGTGAG ACGCAGACGA CGTTCAGCTA CTGGCTGGGT AAGATCGGCG ACGCGCAGGT GGGACCGATT TACCTCGGCT ACACCGGCGT GGCGTCCCTG CTCTGCGGGT TTGTTGCCAT CGAGATCATC GGCCTCAACA TGTTGGCCTC GGTGGACTGG AGCCCGATCG CGTTCCTGAA GAACTTCTGC TGGCTGGCTC TTGAGCCGCC GAAGCCGGAA TATGGCCTCG GCTTCGCGCC GCTCAAGGAA GGCGGCTGGT GGTTGATGAC CGGCTTCTTC CTGACCACCT CGATCGTTCT GTGGTGGGTT CGGACCTATC GCCGCGCTCG CGCGCTCGGC ATGGGCACGC ACGTGTCGTG GGCGTTCGCC TCGGCGATCT TCCTGTACTT CTCGCTCGGC TTCATTCAGC CGGTGTTGAT GGGGAGCTTC AGCGAAGCGC CGCCGTTCGG GATCTTCCCG CATCTCGACT GGACCAACAA CTTCTCGATC AAGTACGGCA ATCTCTACTA CAATCCGTTC CACTGTCTCT CGATCGCGTT CCTGTACGGC TCGGCTCTGC TGTTCGCCAT GCACGGTGCG ACCATCTTGG CCGTGAGCCG CTACGGCGGT GAGCGCGAAA TCGAGCAGGT CGTCGACCGT GGTACGGCGC TCGAGCGTGC GGCGTTGTTC TGGCGCTGGA CGATGGGCTT CAACGCCACG GCCGAGTCGA TCCATCGCTG GGCCTGGTGG TTTGCGGTTC TGACCACCCT GACGGGCGGT ATCGGCATCA TCCTCACCGG ACCGGTCGTC GATAATTGGT TCGACTGGGG CGTCAAGCAC GGGCTGGCGC CGCCCCGGTA A
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Protein sequence | MAYQNIFSQV QVQSAAHHGV PLRPGSSARE TQTTFSYWLG KIGDAQVGPI YLGYTGVASL LCGFVAIEII GLNMLASVDW SPIAFLKNFC WLALEPPKPE YGLGFAPLKE GGWWLMTGFF LTTSIVLWWV RTYRRARALG MGTHVSWAFA SAIFLYFSLG FIQPVLMGSF SEAPPFGIFP HLDWTNNFSI KYGNLYYNPF HCLSIAFLYG SALLFAMHGA TILAVSRYGG EREIEQVVDR GTALERAALF WRWTMGFNAT AESIHRWAWW FAVLTTLTGG IGIILTGPVV DNWFDWGVKH GLAPPR
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