| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1295 |
|---|
| Symbol | |
|---|
| ID | 3974013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 1410129 |
|---|
| End bp | 1411577 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637924405 |
|---|
| Product | chlorophyllide reductase subunit Z |
|---|
| Protein accession | YP_531176 |
|---|
| Protein GI | 90422806 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
|---|
| TIGRFAM ID | [TIGR01278] light-independent protochlorophyllide reductase, B subunit
[TIGR02014] chlorophyllide reductase subunit Z |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGTCC TCGACCATGA TCGCGCGGGC GGCTATTGGG GCGCGGTGTA CGCCTTCACC
GCCTTGAAGG GCCTGCAGGT GATCATCGAC GGCCCGGTGG GCTGCGAAAA TCTGCCGGTG
ACGTCGGTGC TGCATTACAC CGACGCGTTG CCGCCGCATG AATTGCCGAT CGTCGTTACC
GGGCTCGGCG AGGAAGAACT CGGCCAGACC GGCACCGAAG GCGCGATGAA GCGCGCGCAC
CGCGTGCTCG ATCCGTATCT GCCGGCGGTG GTGGTCACCG GATCGATCGC CGAGATGATC
GGCGGCGGCG TCACCCCGGA AGGCACCAAT ATCAAGCGCT TCCTGCCGCG CACCATCGAC
GAGGATCAGT GGCAGAGCGC CGACCGCGCC ATCGTCTGGC TGTGGAAGGA ATACGGCACC
AAGAAGATTC CGGAGCGCAA GCCCCGCGCG GAAGGCGTCA AGCCGCGGGT CAACATCATC
GGGCCGATCT ACGGCACCTT CAACATGCCG TCGGATCTCG CGGAAATCCG CCGCCTGATC
GAAGGCATCG GCGCCGACGT CAACATGGTA TTCCCGCTCG GCACGCATCT CGCCGACATC
CCGAAGCTGG TGAATGCCGA CGTCAACGTC TGCATGTACC GCGAATTCGG CCGGATGCTG
TGCGAAGCGC TGGAGCGGCC CTATCTGCAG GCGCCGATCG GGCTGCATTC CACCACCAAA
TTTCTGCGCA AGCTCGGCGA ATTGCTCGGG CTCGATCCCG AGCCGTTCAT CGAGCGCGAA
AAGCACACCA CCATCAAGCC GCTGTGGGAT CTGTGGCGCT CGGTGACGCA GGACTTCTTC
GGCACCGCGA GCTTTGCCAT CGTCGCCAAC GAGACCTATG CGCGCGGCGT GCGCAATTTC
CTCGAGACCG AGATGGGGCT GCCCTGCACT TTTGCGGTGT CGCGGCTGGC CGGCAAGAAG
ACCGACAACG ACGCGGTGCG CGCCGCGGTG CGCGAAAAGC CGCCGCTGAT CATGTTCGGC
AGCTACAACG AACGGATGTA CCTCGCCGAG GCGGGCAGCC GCGCGATCTA CATTCCGGCG
TCGTTCCCCG GCGCGGTGAT CCGCCGGCAT ACCGGCACGC CGTTCATGGG CTATTCCGGC
GCGACCTATC TGGTGCAGGA AGTCTGCAAC GCGCTGTTCG ATGCCTTGTT CAATATCCTG
CCGCTCGCCG CCGATCTCGA TCGGGTAGAT CCGACGCCGG CGCGTCGGCA CGAGGAAATC
GCCTGGAGCG ACGAAGCTAA GGCGCTGCTC GACGAAGTGC TCGAGAGCCA TCCGGTGCTG
GTACGCATTT CGGCGGCCAA ACGGCTGCGC GATGCCGCGG AAAGCAGCGC GCGTCGTGCC
GGCGAAGAGC GGGTGACCAC GGACTTTGTT ACCAAGGCCC GCGCTCTCAT GGAAGGTCAG
TCGGCATGA
|
|---|
| Protein sequence | MLVLDHDRAG GYWGAVYAFT ALKGLQVIID GPVGCENLPV TSVLHYTDAL PPHELPIVVT
GLGEEELGQT GTEGAMKRAH RVLDPYLPAV VVTGSIAEMI GGGVTPEGTN IKRFLPRTID
EDQWQSADRA IVWLWKEYGT KKIPERKPRA EGVKPRVNII GPIYGTFNMP SDLAEIRRLI
EGIGADVNMV FPLGTHLADI PKLVNADVNV CMYREFGRML CEALERPYLQ APIGLHSTTK
FLRKLGELLG LDPEPFIERE KHTTIKPLWD LWRSVTQDFF GTASFAIVAN ETYARGVRNF
LETEMGLPCT FAVSRLAGKK TDNDAVRAAV REKPPLIMFG SYNERMYLAE AGSRAIYIPA
SFPGAVIRRH TGTPFMGYSG ATYLVQEVCN ALFDALFNIL PLAADLDRVD PTPARRHEEI
AWSDEAKALL DEVLESHPVL VRISAAKRLR DAAESSARRA GEERVTTDFV TKARALMEGQ
SA
|
|---|
| |