Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1292 |
Symbol | |
ID | 3974010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1406563 |
End bp | 1407501 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637924402 |
Product | chlorophyll synthesis pathway protein BchC |
Protein accession | YP_531173 |
Protein GI | 90422803 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.557633 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACCA TCGCGGTAGT GCTGAAGCAG CCGAAACATG TTGAAGTCAA TCGGCTGGCT TTAACGGCTC CGACTGTCGA CGATGTCGTC GTCGATGTGG CCTGGAGCGG GGTCAGTACC GGTACGGAGC GTCTGCTCTG GTCGGGCCGC ATGCCGTCGT TTCCCGGAAT GGGCTACCCG CTGGTCCCCG GCTACGAGTC GGTCGGCGAG GTGGTGGAAG CTGGTTCGGC GACCGACTTG CGTCCCGGCC AAATGGTGTT CGTGCCCGGC GCAAAGTGCT TCGGCGAAGT TCGCGGCCTG TTCGGCGCCT CGGCGTCCCG GCTTGTTGTC CCAGCGAAGC GCGTCATCGC GCTCGATCAG AGCCTGGGTG AGCGCGGAAT TCTGCTGGCG CTGGCGGCGA CGGCCTATCA CGCCATCGCG GCGCGCGGCG GACGCCCGCC CGAATGCATT GTCGGCCACG GCGTACTTGG CCGCTTGTTG GCGCGGATCG CCGTTGCGCT CGGCAATCCG CCGCCGGTGG TGTGGGAAAA GAACCCAGTC CGCGCTGGCG GCGCCGACGG ATATAGCGTC ATCGATCCCG CGGACGACGC CCGGCGGGAC TACCAAAGCA TCTACGACGT CAGCGGCGAT CCGACATTGT TGGACTCTTT GATTTCGCGC ATCGCGGCGG GCGGAGAAAT CGTGCTGGCT GGTTTTTATA GCGATCCTTT GTCGTTCGCG TTTCCGCCGG CATTCATGCG CGAGGCCCGG ATCCGGGTCG CCGCCGAATG GCAGCCGCCG GATATCGCGG CGACCAAGGA CTTGATCGAA ACAGGGCGGC TTTCGCTCGA TGGATTGATT ACGCATCACC ATGACGCGAA AGCCGCGCCG GATGCCTACC GGATCGCTTT TGAAGATGCT GCATGTCTGA AGATGGTTTT GAACTGGAGA TTGAGCTGA
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Protein sequence | METIAVVLKQ PKHVEVNRLA LTAPTVDDVV VDVAWSGVST GTERLLWSGR MPSFPGMGYP LVPGYESVGE VVEAGSATDL RPGQMVFVPG AKCFGEVRGL FGASASRLVV PAKRVIALDQ SLGERGILLA LAATAYHAIA ARGGRPPECI VGHGVLGRLL ARIAVALGNP PPVVWEKNPV RAGGADGYSV IDPADDARRD YQSIYDVSGD PTLLDSLISR IAAGGEIVLA GFYSDPLSFA FPPAFMREAR IRVAAEWQPP DIAATKDLIE TGRLSLDGLI THHHDAKAAP DAYRIAFEDA ACLKMVLNWR LS
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