| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1289 |
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| Symbol | |
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| ID | 3974007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1402776 |
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| End bp | 1404326 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637924399 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_531170 |
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| Protein GI | 90422800 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.571457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAGTC CGCGCCTTGC GAAGGATCAA GTGGTCATTG TCGGTGCCGG CATCGCCGGG
CTCACCGCGG CGTTCGCGCT GGCCGCCCGC GGCCTCGCGG TGACGGTGCT CGAGCAGGGA
ACGGCGCCGG GCGGCAAGAT GCGGCAGATC GGCATCGGCG GCTCGCGGAT CGATTCCGGG
CCGACCGTCT TCACCATGCG CTGGGTGTTC GAGGAATTGT TCGCAGCGGC CGGCAAGACT
TTTTCCGACC ACGTCCGGTT GCGGCCGCTG GATGTGCTGG CCCGCCACGC CTGGGACGAG
CACGCGCATC TCGATCTGTT CGCCGACGAG GCGCGCTCGG CCGAGGCGAT CGGGGATTTT
GCCGGCGCCG CCGAGGCCAA GCGGTTTCAA GCGTTCTGCG CCGACAGCCG GCGGATCTAC
AAGATTCTCG AGCAGCCGTT CCTGCGCGCC GAAAAGCCCA GCCTCGCCGG GCTGATCGCC
GCCGACGGGT TTCGCGGGCT GATCGATCTG CCGAAGATCC GCCCGTTCAC CACGATGTGG
ACTGCGCTCG GCGACTATTT CCACGACTCC CGGCTGCGCC AGATGTTCGG GCGCTACGCC
ACCTATTGCG GCTCCTCGCC CTATCTGGCG CCGGCCACCC TGATGCTGGT CGCCCATGTC
GAGCGCGAAG GCGTCTGGGT GCTGGAGGGC GGCATGCATT CGCTGGCGGT GGCGCTGGCG
GATTGCGCCG CCGAGTTCGG CGCCGAGATC CGCTACGAGC AGACCGTGCG GGAAATCCTG
ACCGCGAATG GCCGCGCCTG CGGCGTGGCG CTGGCCGACG GCGAGCAGAT CGAAGCCGAC
AACGTCATCG TCAGCGCCGA TGTGGCAGCG CTTGGCGGCG GGCTGTTCGG TAAGGCCGCG
GCCCGCGCCG CGGCGCCGAT CGTGCCCTCC AAACGCTCGC TGTCGGCGAT CACCTGGAGC
CTGGTGGCGA AGACCGAGGG CTTTCCGCTG AGCCGGCATT CGGTGTTCTT TTCCCGCGAC
TACGCGGCCG AGTTCGAGGA CATCTTCGGC CGCGGCGCGG TGCCGAGCGA ACCCACGGTC
TATGTCTGCG CGCAGGACCG CACCGACGAC CAGGCGATGC TGCGCGAAGA TGGCGCCGAC
GAATTGCTGG TGCTGATCAA CGCGCCGGCG ATCGGCGACC GCTACGCCTT CGGCAAGGCG
CAGGTCGAGC GCTATGCGGA GCGCGCGTTC GCCCGGCTTG AGCGTTGCGG TCTACGGATC
GCGCGCAATG AGGAGGCCAC GCAAGTGACG ACGCCTGCGG ATTTCAACCG GCTGTTTCCG
GCCACCGGCG GCGCGCTGTA TGGCCGCGCC TCGCACGGCT GGACCGCCTC GTTCCAGCGC
CCCGGCGCCC GCACCAAGAT CGACGGGCTG TATCTGGCCG GCGGCAGCAC CCATCCTGGA
CCCGGCGTGC CGATGGCGGC GTTGTCCGGG CGTTCCGCCG CCGCGAGCCT GTTCGCGGAC
CTGCAACGCG CCCCCGGCAC CAAGCCGGTG CTACGCCCGA TCACGCCCTG A
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| Protein sequence | MLSPRLAKDQ VVIVGAGIAG LTAAFALAAR GLAVTVLEQG TAPGGKMRQI GIGGSRIDSG
PTVFTMRWVF EELFAAAGKT FSDHVRLRPL DVLARHAWDE HAHLDLFADE ARSAEAIGDF
AGAAEAKRFQ AFCADSRRIY KILEQPFLRA EKPSLAGLIA ADGFRGLIDL PKIRPFTTMW
TALGDYFHDS RLRQMFGRYA TYCGSSPYLA PATLMLVAHV EREGVWVLEG GMHSLAVALA
DCAAEFGAEI RYEQTVREIL TANGRACGVA LADGEQIEAD NVIVSADVAA LGGGLFGKAA
ARAAAPIVPS KRSLSAITWS LVAKTEGFPL SRHSVFFSRD YAAEFEDIFG RGAVPSEPTV
YVCAQDRTDD QAMLREDGAD ELLVLINAPA IGDRYAFGKA QVERYAERAF ARLERCGLRI
ARNEEATQVT TPADFNRLFP ATGGALYGRA SHGWTASFQR PGARTKIDGL YLAGGSTHPG
PGVPMAALSG RSAAASLFAD LQRAPGTKPV LRPITP
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