| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1221 |
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| Symbol | |
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| ID | 3969098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1336452 |
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| End bp | 1338050 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637924332 |
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| Product | periplasmic sensor hybrid histidine kinase |
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| Protein accession | YP_531103 |
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| Protein GI | 90422733 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00178023 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTGGGCAT TTCTGCAAGG CTTGTTGGAC ACTTCGACGT TCTCGCCTCA CGGAATTTGC
CTGCTGTGGG AACCCGGACT GATCTGGCTG CATGTGGTGT CCGACGCCGC AATCGCGCTG
GCATATTTCT CGATCCCGTT CGCGTTGTCG TATTTCGTCG CCAAGCGACC GGACGTCGAA
TTCGGGTGGG TGTTTTGGGC CTTCTCGATC TTCATCTTGG CTTGCGGCTT CACCCACATC
TTCGCCATCG TGACGTTGTG GATTCCGATC TACGAACTGG AAGGGATCAT CAAGGCGCTC
ACCGCGATCG CTTCGCTGGT CACCGCCGCG ATGCTGTGGC CGCTGTTGCC GAAACTGCTC
GCGGTGCCGT CACCGTCGCA ATTGCGAGAG GCGCAGCATG CCTTGCACAT GGAGACGTTG
CAGCGCCGTG AGGCGGAAGA CATGCTGCGG CAGTCGCAAA AGATGGAAGC CGTCGGACAA
TTGACCGGCG GCGTGGCGCA CGACTTCAAT AATCTGCTCA CCATCATCAT CGGCAATCTG
GAGATTGCGC AACGCGACCT CGGCAAGCTG CGCGACGGCG TCGATGGCCG GCTGCGTCGG
CTGATCGGCG GCGCGATGTC CGGTGCGCAG CGCGCTGCGA CCTTGACCAG CCGGCTGTTG
GCGTTTGCCA GGCGGCAGCC GCTCGACCCC AAGGCCTGCA ATCTCGACCA ATTGCTGAAA
GGCATGGCCG GCTTCTTCCG CAGCACATTG GGCGAGACCA TCGATCTGGA ATATGTCGGC
ACCGCCGGGC TGTGGCAGGC CGAGATCGAT GCCAGCCATT TCGAGACGGC GATGCTCAAC
CTAGTGGTCA ATGCCCGTGA CGCGATGCCC GACGGCGGCA AGCTCACCAT CGAAACCAGC
AACGTGTTTC TCGACGAGGA CTATGCGCGT CGCCACGCCG AGGTCGCGGC CGGGCAATAT
GTCCAAGTCG CAGTGACCGA TACCGGTGTC GGAATGACCG CCGACATCGT GGCCCGGGCC
TTCGAGCCGT TCTTCACCAC CAAGGATGTC GGCCAGGGCA CCGGGCTGGG GCTCAGTCAG
GTCTATGGCT TCGTCAAGCA ATCCAACGGT CACATCAAGA TCTATAGCGA GGTCGGCCAG
GGCACCACCA TCAAGCTCTA TCTGCCGCGG CTGCATGCGA CGTCCGCAGC CGAGCAGGGG
CCCGACGATA TTCAGGTCGG GGCGGCGCGG GCGGAGCAGA TCCTGGTCGT GGAAGACGAT
CCGGAGGTCC GCGACTATGT CGTCGAAGTT TTGGAGGATC TCGACTACCG GGTGTTCCAG
GCGGCCGATG CCGGCGCCGC GCTCGGCATC ATCGGCAAGC TCGACGGCGG ACTCGATCTG
CTGTTGACCG ATGTGGTGCT GCCGGGAATG AACGGCCGCG AACTCGCCGA CCAACTGCGT
CAGCAACGCC CAGATCTGAA AGTGCTGTTC ATGACGGGGT ATTCCCGCAA CGCGATCGTG
CATCAGGGCA GGCTCGACGT CGGTGTCGAC CTTATTCAGA AACCGTTGTC GCAGGCGGCG
CTGGCGGCAA AAATCCGCAG CATCCTCGAT CGCGTCTGA
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| Protein sequence | MWAFLQGLLD TSTFSPHGIC LLWEPGLIWL HVVSDAAIAL AYFSIPFALS YFVAKRPDVE
FGWVFWAFSI FILACGFTHI FAIVTLWIPI YELEGIIKAL TAIASLVTAA MLWPLLPKLL
AVPSPSQLRE AQHALHMETL QRREAEDMLR QSQKMEAVGQ LTGGVAHDFN NLLTIIIGNL
EIAQRDLGKL RDGVDGRLRR LIGGAMSGAQ RAATLTSRLL AFARRQPLDP KACNLDQLLK
GMAGFFRSTL GETIDLEYVG TAGLWQAEID ASHFETAMLN LVVNARDAMP DGGKLTIETS
NVFLDEDYAR RHAEVAAGQY VQVAVTDTGV GMTADIVARA FEPFFTTKDV GQGTGLGLSQ
VYGFVKQSNG HIKIYSEVGQ GTTIKLYLPR LHATSAAEQG PDDIQVGAAR AEQILVVEDD
PEVRDYVVEV LEDLDYRVFQ AADAGAALGI IGKLDGGLDL LLTDVVLPGM NGRELADQLR
QQRPDLKVLF MTGYSRNAIV HQGRLDVGVD LIQKPLSQAA LAAKIRSILD RV
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