Gene RPC_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1188 
Symbol 
ID3969143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1297926 
End bp1298849 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content67% 
IMG OID637924299 
Producthypothetical protein 
Protein accessionYP_531070 
Protein GI90422700 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACG CACTGCTCTT GAAACTTCAT CGCTGGACCA GCCTGGTGTT CGCGCTGCCG 
CTGATCGTGG TGCTGCTCAC CGGCTTGATC TTGTCGTTCG AGCCGATCGT GCAGGACCGC
GCGCTGGATC CTGCGCTGGT CAATGCCGAC CGCGTCACAT CTCTGATTCA GCGCTTCGAT
CCCGACGGCC GGGCCCGCGG ATTGTCGATC AGCGCAGTCG GCCAGCGGCT GCAGCTGCAA
GGTACCCCGG CGCCGGCGAT CGATCTGGTG ACCGGCGAGG CTGCGACCAC CAGCGATGTG
GCGGGCAGCG TCATTCTGTG GTCGCGGCGC ACCCATGAGC ATCTGTTCGA TCAGGAATGG
CTGCTGATCG CCTCGACCAT CGGCATGGTG GCGATCATGA TCATCGGCAC CCTGATGGGC
CTGCCGCGGC TGCGCAACAG CCTCGCCGGC TGGCACAAGG GCATGGCCTG GTTCACGATT
CCGTTGCTGT TGCTGAGCCC GATCACGGCC CTGTTCATGC TGTCCGGTAT CACCTTCCAG
GGCGCGCCGC CGGCCGCGGC CGCCAAGCCG TTGCCGCTGA TCGAGGCGGT CCGCGCGATC
GCGCAATCCC ACGATCTGGC CAAGCTGACC TCGTTGCGCA ATCGCGGCGG CCGGGTGATG
GCGAGGATCT ACGAGGACGG CGAACTGCGC GCCTATACGG TCAGCGCCGA CGGCGTCGCG
CCGCTGCCGC GCAACTGGCC GCGGTTGCTG CATGAGGGCA ATTGGTGGAC GTTGCTGTCT
GGCTCGCTCA ACGTCATCAC CTCGGTCGTG CTGATCGGAC TGCTCGGCAC CGGCCTGGTG
ATGTGGGGAC GGCGCAAGCT GCGGCCGCGC AACCGCCGTG CCGTCGACGT CGGCCGCGGC
GCCGCCGTCG GGCCAGTGTC GTAA
 
Protein sequence
MNNALLLKLH RWTSLVFALP LIVVLLTGLI LSFEPIVQDR ALDPALVNAD RVTSLIQRFD 
PDGRARGLSI SAVGQRLQLQ GTPAPAIDLV TGEAATTSDV AGSVILWSRR THEHLFDQEW
LLIASTIGMV AIMIIGTLMG LPRLRNSLAG WHKGMAWFTI PLLLLSPITA LFMLSGITFQ
GAPPAAAAKP LPLIEAVRAI AQSHDLAKLT SLRNRGGRVM ARIYEDGELR AYTVSADGVA
PLPRNWPRLL HEGNWWTLLS GSLNVITSVV LIGLLGTGLV MWGRRKLRPR NRRAVDVGRG
AAVGPVS