Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1059 |
Symbol | |
ID | 3969630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1164559 |
End bp | 1165515 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637924170 |
Product | malonate decarboxylase subunit beta |
Protein accession | YP_530942 |
Protein GI | 90422572 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0777] Acetyl-CoA carboxylase beta subunit |
TIGRFAM ID | [TIGR03133] malonate decarboxylase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.246574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAACT GGAATAAAAT ACAGACAAGC TCTTTTCTGG AGAGCAACGC TCGTGATCGG GCGATCGGCC TCGTCGACGA AGGCAGCTTC GTCGAGTTGG TCGGCCCGTT CGATCGGTTC TGCAGTCCGC ATCTCGTCAC GCTCGGCGAA GCGGTGGAAT TCGACGACGG CATCGTCACC GGCGTCGGCA AGATCGGCCA GCGCCCGGTG TTCGTGATTT CGCAGGAAGG CCGCTTCATC GGCGGTTCGG TCGGCGAAGT CGGCGGCGCC AAGATGGTCG GCACCATCGA TCAGGCGATC GAGTTCTATG ACAACCTGAT CGTCGAATTC CCGAACTTGC CGGACGCGCA GCGGCCGTTG GTGGCGATCT CGTTCGAGAC CGGCGGCGTG CGTCTGCACG AAGCCAACGC CGGCCTGCTG GCGCATGCCG AGGTGATGGA CGCCATCCAG CGCGCCCGCC ACAAGGTTCC GGTCGTCGCC CTGATCGGTT CGCGGATCGG CTGCTTCGGC GGCATGGGCT TCGTCGCCGC GGCGACCGAC GCCATCATCA TGAGCGAATT CGGCCGGCTC GGCCTGACCG GTCCGGAAGT GATCGAGCAG GAGATGGGCA AGGACGAGTT CGACAGCTCG AACCGCGCGC TGGTCTATCG CACCACTGGT GGCCGCCACA AATTCGTGAT GGGCGACTGC AACTTCCTGG TCGACGACAC CGTGGCTTCG TTCCGCGCTC AGCTGACCGA ACTGACTCTG CTGTCGATCG CCGAATTCGA ACCGCTGCGT CGCATCGGCT CGGAGGCGCT CGTCGAGAAG CAGCTGCGCG GTGTCGCGCT CGCGGTGAAG ATCGCGCCGA CCGACGCCCG CGACGTCTGG CGCTATGCCG GCAACAACGA TCCGATCGGC CTCGCCGACG GTCCCATCGC GGAGTTCCGC AAGACCGTTC AACGCTTGGT TCTGTGA
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Protein sequence | MPNWNKIQTS SFLESNARDR AIGLVDEGSF VELVGPFDRF CSPHLVTLGE AVEFDDGIVT GVGKIGQRPV FVISQEGRFI GGSVGEVGGA KMVGTIDQAI EFYDNLIVEF PNLPDAQRPL VAISFETGGV RLHEANAGLL AHAEVMDAIQ RARHKVPVVA LIGSRIGCFG GMGFVAAATD AIIMSEFGRL GLTGPEVIEQ EMGKDEFDSS NRALVYRTTG GRHKFVMGDC NFLVDDTVAS FRAQLTELTL LSIAEFEPLR RIGSEALVEK QLRGVALAVK IAPTDARDVW RYAGNNDPIG LADGPIAEFR KTVQRLVL
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