| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1031 |
|---|
| Symbol | |
|---|
| ID | 3969641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 1131553 |
|---|
| End bp | 1132074 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637924143 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_530915 |
|---|
| Protein GI | 90422545 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.552189 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGGA ATACGAAAAC TGCTTCTGAT AACGCCACGA CAAAGATCGA ATTGGCTAAC
CGATTGTTTT TTCGGCTCTA CCAATGCGCC AATATGTTGC ATAAAACCGG GACGCGCGCC
GTCGAAGCGG AGGGAATCAC CACCCAGCAA TGGGCGGTGC TGGGAGCGCT GTCGCGGCCT
GCCGCCAAGG AAGGGATGAG TATCGGCGAT CTCGCGCGCT ATCTGATGGT CAGCCGGCAG
AATCTCGCCG GGCTGATCGG CCGCATGGAG CGCGACGGGC ACGTCGAGAT CCTGCCGGAT
GAACGCGATC GTCGCTCACG CTTGGTGACA ATGACCGACA GGGGGCGTCA TGTTTGGCAT
GTTCTCGCTC AGCCCAAGAT CCGCGCCTAT TACGATCAGG TGCTTGCGGA TTTCTCGATC
AACGACACCA CGCATGCGCT GCACTATTTG CTCAAGATTC TCGACAATAT GAAGCGGATC
GATGAGGGCG CGCCTGACGT CGATCCAGAC CGAAACATTT GA
|
|---|
| Protein sequence | MARNTKTASD NATTKIELAN RLFFRLYQCA NMLHKTGTRA VEAEGITTQQ WAVLGALSRP
AAKEGMSIGD LARYLMVSRQ NLAGLIGRME RDGHVEILPD ERDRRSRLVT MTDRGRHVWH
VLAQPKIRAY YDQVLADFSI NDTTHALHYL LKILDNMKRI DEGAPDVDPD RNI
|
|---|
| |