Gene RPC_1029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1029 
Symbol 
ID3969639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1128983 
End bp1130167 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content62% 
IMG OID637924141 
Productbenzoyl-CoA reductase, subunit C 
Protein accessionYP_530913 
Protein GI90422543 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB 
TIGRFAM ID[TIGR02263] benzoyl-CoA reductase, subunit C 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACA GGGCGCGCCA GACCACGGGC GACATCGTCG CCCGCTGCGA AGCGCTGTTT 
TCCGACCTCA GTTTCACCGC CGCCCGCGAA TGGAAGGCGG CCGAACCCGG CCGCATCGTG
GTCGGCTTCC TGCCCTACTA CGCGCCGCGC GAGCTGGTAC ATGCAGCCGG CGGGCTGCCA
CTCGGAATCT TCGGCGGTGG CGACCAGCTA GAGGTCATCC ACGGCGACGC CTATTACCAG
AGCTATATCT GCCGAATTCC GCGCTCGACC ATCGAGCTCG GCGTTTCCGG CAGGCTCGAT
TTCGTCGACG GCATGATGTT TCCCTCGATC TGCGACGTGA TCCGCAATCT GTCGGGGATG
TGGAAGCTGA TGTTTCCCGA GAAGGGCGCG CGCTATATCG ATCTGCCGCA CAATTTCGAG
GATGACCTCG GCGGCGACTT CTATGTCAGC GAATTGCGCG AGACCTGCGA GTGGCTCTCC
GGAATGACCG GTAAGCCGAT CACCACCGAA GCCCTGCGCG CCTCGGTCGC TGCGTTCAAC
GAGAACCGCC GACTGATCCG CGAGCTCTAC GCGCTACGCG CGGTTGAGCC GTGGAATGTT
CCCTCCTCCG AGCTATATTT GCTGCTCCGC GCCGGTATGG TGATCCCGGT CGAGCAGCAC
AATCAGTTGC TCGGAGAATA TCTCGCCGCC GCGCGGCTGC AGCAGCGGCC GATCAAGGAC
AATTCCCGCG TGGTGATCTG CGGCATGTTC TGCGAGCAGC CGCCGCTCAA CCTCATCAAG
TCGATCGAGC TGTCGGGCTG CTACATAGTC GATGACGATT TCATCCTGGT CACCCGCTGG
GAGAATTCCG ACGTCGCGCT CGACGGCGAT CCGCTGAAGA ATTTGGCGAA CGCCTATCTG
CACGATTCCA AATCGACACC GCCGAAATAC GAGCCCGACG AGGCCAAGAA GGGCCTTTAT
CTCGTCGATA GCGTGCGCAA GAACCGCGCC GAGGGCGTGA TCTTCGCGAT GACCAGCTTC
TGCGATCCCG GCCTGCTGGA GCGCCCGATG CTGCAGGCGG TGCTGAAGAG CCACAACATC
CCGCAGATCG CTTTCAAATA CGCCGAAAAT TCCGGCCAGA TGCAGCCGAT CCGCGAGCAG
GCCGGCACCT TCGCCGATTC GATCAAACTG TGGAGCGGGG CATGA
 
Protein sequence
MLDRARQTTG DIVARCEALF SDLSFTAARE WKAAEPGRIV VGFLPYYAPR ELVHAAGGLP 
LGIFGGGDQL EVIHGDAYYQ SYICRIPRST IELGVSGRLD FVDGMMFPSI CDVIRNLSGM
WKLMFPEKGA RYIDLPHNFE DDLGGDFYVS ELRETCEWLS GMTGKPITTE ALRASVAAFN
ENRRLIRELY ALRAVEPWNV PSSELYLLLR AGMVIPVEQH NQLLGEYLAA ARLQQRPIKD
NSRVVICGMF CEQPPLNLIK SIELSGCYIV DDDFILVTRW ENSDVALDGD PLKNLANAYL
HDSKSTPPKY EPDEAKKGLY LVDSVRKNRA EGVIFAMTSF CDPGLLERPM LQAVLKSHNI
PQIAFKYAEN SGQMQPIREQ AGTFADSIKL WSGA