Gene RPC_1015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1015 
Symbol 
ID3969664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1115103 
End bp1115594 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content63% 
IMG OID637924128 
Product(2Fe-2S)-binding 
Protein accessionYP_530900 
Protein GI90422530 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID[TIGR03193] 4-hydroxybenzoyl-CoA reductase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGAAC CGATGCCACG GCAACACAAG CGATTGCTAC GCCTGAAGGT CAACGGACGC 
TGGCGCGAGG ACGCGGTCGC CGACGGCCTG ATGCTGATCG ACTACCTGCG CGATGTGGTC
GGCCTGACCG GGGCCAAGAC CGGCTGCGAC GGCGGCGAAT GCGGCGCTTG CACCGTGCTG
ATCGACGACG AAGCCGTACT GTCCTGCCTC ACGCTTGTTG TGCGCTGCGA AAGCAGTCAC
GTCGAAACCA TCGAAGGCCT GGCAACCAAG GGTGGCCTCA ATCGGCTGCA ACAGGCCTTT
CACGAACGGC TCGGCACGCA ATGCGGATTC TGTACGCCAG GAATGATCAT GGCTGCGGAA
AGCTTGCTGC GGCGCAATCC GTCTCCCACC GAGGCCGAAA TTCGGACAGC GCTCTCGGGC
AATCTCTGCC GCTGCACCGG ATACACGAAG ATACTCGAAT CAGTTCAGGC AGCCGCGGAG
CTGGCGCCAT GA
 
Protein sequence
MHEPMPRQHK RLLRLKVNGR WREDAVADGL MLIDYLRDVV GLTGAKTGCD GGECGACTVL 
IDDEAVLSCL TLVVRCESSH VETIEGLATK GGLNRLQQAF HERLGTQCGF CTPGMIMAAE
SLLRRNPSPT EAEIRTALSG NLCRCTGYTK ILESVQAAAE LAP