Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1001 |
Symbol | |
ID | 3969688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 1099996 |
End bp | 1100829 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637924118 |
Product | IstB-like ATP-binding protein |
Protein accession | YP_530890 |
Protein GI | 90422520 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1484] DNA replication protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0045417 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGACGC GCGACAACAC ACCAGCGCCC ATCACGGTCG ATCTCGCTCG CCTGCCGATG CTGCTGACCT CCCTGCGGCT GCCGACCATC GGCCAAATGT GGGCGGACCT CGCCGAGCGT TCAGACCGCG AAGGCTGGCC GGCCGCTCGC TATCTTGCGG CCTTGCTCGA GCACGAGCTT GCCGAACGCT ATCAACGTCG AATCCAGCGC AACATGCAGG ACGCTCACCT GCCGGCGGGG AAGAGCTTCG CCACCTTCGA CTTCGCCGCC GTCCCGATGA TCAACAAGAG CCAGATCACC GCGCTCGCGG CCGGCGGTTC TTGGCTCGAC AAAGGCGCCA ATCTATTGGC CTTTGGCCCG CCAGGCGTTG GCAAGTCGCA TCTCGGCGCA GCTCTCGGCC AGGCTCTCAT CGAAAACGGC TATCGTGTTC TGTTCACCCG CACGACCGAC ATGGTGCAAC GACTTCAGGC CGCTCGCCGC GATCTAACGC TGCAAAACGT CATGGAAAAG CTCGACAAAT ACGACCTGCT CATCCTCGAT GACCTCTCTT ACGTCCGCAA GGATCAGGCC GAAACCAGCG TGCTCTTCGA ACTCATCTCC GCCCGTTACG AGCGTCGCAG CTTGCTCATT ACAGCTAATC AGCCATTCGG GGGCTGGGAG GAAATCTTCC CCGACAAGGC AATGACCGTG GCCGCCATCG ACCGCCTCGT GCACCACGCC GTCATTCTGG AAATGAACAC CGACAGTTAT CGTCGCAAGG CCGCAGTCAC GCGAATGACC GATCGGAAGG CCTCGGAAAA CTCAAAGCAA AAGCCTGTAA CCAAAACGAT CTAA
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Protein sequence | MLTRDNTPAP ITVDLARLPM LLTSLRLPTI GQMWADLAER SDREGWPAAR YLAALLEHEL AERYQRRIQR NMQDAHLPAG KSFATFDFAA VPMINKSQIT ALAAGGSWLD KGANLLAFGP PGVGKSHLGA ALGQALIENG YRVLFTRTTD MVQRLQAARR DLTLQNVMEK LDKYDLLILD DLSYVRKDQA ETSVLFELIS ARYERRSLLI TANQPFGGWE EIFPDKAMTV AAIDRLVHHA VILEMNTDSY RRKAAVTRMT DRKASENSKQ KPVTKTI
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