Gene RPC_0996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0996 
Symbol 
ID3969683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1090686 
End bp1090955 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content61% 
IMG OID637924113 
Productconjugal transfer TraD 
Protein accessionYP_530885 
Protein GI90422515 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000550634 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGCAGTT GGCAGGTCGA GCGGCGCAAA CGCACGCGGC GTCTGATCGA ATTGGGGGGC 
CTCGTCGTCA AAGCTCGTGT CGTGGACCTG AGCGGCGATG ATCGCGCTAT TATCCTCGGC
GCGCTGCTCT GGATGGCAGA CAAGCTCAAA AGCAATCAAG GCGAACACGC CCGAGCGCTC
TGGGCCGCAA TGGGAAAGAA GGCATTCGCT TTGGAACGGG CGACAGAAAA GCCCACCATC
CCGCAGGAAT GGCCGCGAGA TCGGGCATGA
 
Protein sequence
MRSWQVERRK RTRRLIELGG LVVKARVVDL SGDDRAIILG ALLWMADKLK SNQGEHARAL 
WAAMGKKAFA LERATEKPTI PQEWPRDRA