Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0992 |
Symbol | |
ID | 3969679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1085525 |
End bp | 1085995 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637924109 |
Product | hypothetical protein |
Protein accession | YP_530881 |
Protein GI | 90422511 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000200061 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000049883 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGACATCA ACGACCCGCG CTTGGAGGAA GCGCACAAGA ACATGGTCGA GCGCGTCGAA AAGTACGACG AGCGGATCGT GACCGTTTTG AAATGTCACC TCACGGCAGA GCAGGCACTG GACGATTTAC TCGGATCAGC GTCCAGGCGA TGGAAGCGCC GTTCCTTCGC CGGCAAAATC GATGTGGTGG AAAAGCTTTT CTTGCCGGAG CTCGATCCGC CGATGTGGGC TGTGCTGAAG GCGGGCAACG ATCTACGCAA CGCCGTGGCT CACGGACACA AGGAGGGGAC GGTCACCCAG CGGATGGCCG ACCTACGCAA AGCACTCCTC GCCTGGGTGC CGCCTGAACA GAGACCGGGT GTTGAAGCTA TGACCGATCC TCAGATGGTC AGCACCGCAT TCTTCCAATG TGCCAGCTTC ATCGTCGTTG CCACAGATCG CCTCATAGAG AAGCACAAAA GGAAGAAGTG A
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Protein sequence | MDINDPRLEE AHKNMVERVE KYDERIVTVL KCHLTAEQAL DDLLGSASRR WKRRSFAGKI DVVEKLFLPE LDPPMWAVLK AGNDLRNAVA HGHKEGTVTQ RMADLRKALL AWVPPEQRPG VEAMTDPQMV STAFFQCASF IVVATDRLIE KHKRKK
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