| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0990 |
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| Symbol | |
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| ID | 3969677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1082994 |
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| End bp | 1084622 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637924107 |
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| Product | recombinase |
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| Protein accession | YP_530879 |
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| Protein GI | 90422509 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.265187 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000829411 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATCCGCG TCGCCATCTA CGCTCGTTTT TCGAGCGACC TGCAAAACGA TAAATCGGTC
GACGACCAGA TCGCGTTCTG CCGCGAGGTC TGCGCTCGCA ATGGCATGAC GGTAGTGTTG
ACCTTCGAGG ACCGGGCTGT GTCCGCGTCG TCGGCGAAGA ATCGTCCCGG CTTCGTCGCG
CTGATGCGCG CTGCGGCGGC AAGACTGTTC GACGTCATCG TTGCTGAAGA CATGGATCGC
ATTTTTCGCG ACCAGGCCGA TTATCACGCT GCTCGCAAGG AACTCGATTT TCTTGGCATC
ACCATCCACA CCGCGACCGG GAAAGTGACC AAGATCGATG GCGCGCTGCG GGCATTGATG
GGCGAAATGT ATCTGGAAAA CCTGGCGCTG CACGTACGGC GCGGACTCGA GGGCGTGATC
CGCGACGGCC GCCACGCCGG TGGACGCGCG TATGGCTATT CCACCGTCCC GGGTTCGCCG
GGCGAGCTCG TCATAGACGA CGCGCAAGCC AAGATCGTGC AGCACATCTT CGCGCGCTTT
GTTGCTGGCG TCACGCCGCG CGCCATTGCT GCCGAACTCA ATGCTGATCG CATTGCGGCG
CCGCGCGGGA CTAGGTGGAA CGCATCTACG ATCAATGGGA ACAACGCGCG CGGTCACGGC
ATGCTGCTCA ATGAGCTTTA TGCCGGCCGT ATCGTCTGGA ACAAGGTGCG GATGGTCAAG
GATCCGACCA CGGGCAAACG GATCTCGCGG ATTAATCCGA AGGAGCAACA TCGAATTACC
GAGGCGCCGC AACTGCGCAT CATCGATGAT GTGACCTGGA ACGCGGCGCA AGCCATCAAG
CTGAAGCGCT CGCACCTCGG CGCGACTCAA TCCCGCGCCC CACGGCGTCC GCTTTCTGGC
TTGCTTCGAT GTGGATCCTG CGGCGGTGGA ATGGTGTCTA TCGGCAATCG CAAGCGGTCG
GCGCGGCTGC AATGCGGCAC CTACAAGGAG AGTGGGGCCT GCACCAACAG CCGCAAGGTC
AACCGCGACG CCGTTGAAGC GGCCGTGTTT GCGGGACTGA AAGACGAACT GTCCAATCCA
ATTGCGATTA CTGAATACAT CAAGGCCTAT AACGACGAGC GGCGACGCCT TGCACGCGAG
GCCAGCGACC AGATGAGCAA GCTGACACGT CGCAATGCCG AGGTCTCACG CGAACTTGAG
CGCCTGATCG ATGCGATAAC CCAAGGTGTC GATCTCGCCA CCTTGGTACC GAGGATCAAG
GAACTTGAAA TCGAGCGCGC CGACATAGAC GGCAAGCTGA AATGCGCCAA CGAAGCCGAT
ATGGTCACAT TGCATCCCGC TACGATCGAG CAATACCGCG CCGATGTAGA GAGACTGGCC
GACCTTGCCG CCGAGCACAG CGACTTCGTG GAATCGGCGG AATTGATCGA AGCGTTACGG
CGGCTGGTGG CCGGAGTCAT CGTCCACGCC GAACCGTACG GCCGGGGCTT CAACGTCGAA
GTGCAGGGAC GATTGGCACA ATTGACGAAT TCGGATTTGT TCCCGACCCG TTCTGATGGA
GGGGGGATCA GTGGTAGCGG GAGAGGGACT CGAACCCCCG ACCCCAGGAT TATGATTCCC
GTGCTCTAA
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| Protein sequence | MIRVAIYARF SSDLQNDKSV DDQIAFCREV CARNGMTVVL TFEDRAVSAS SAKNRPGFVA
LMRAAAARLF DVIVAEDMDR IFRDQADYHA ARKELDFLGI TIHTATGKVT KIDGALRALM
GEMYLENLAL HVRRGLEGVI RDGRHAGGRA YGYSTVPGSP GELVIDDAQA KIVQHIFARF
VAGVTPRAIA AELNADRIAA PRGTRWNAST INGNNARGHG MLLNELYAGR IVWNKVRMVK
DPTTGKRISR INPKEQHRIT EAPQLRIIDD VTWNAAQAIK LKRSHLGATQ SRAPRRPLSG
LLRCGSCGGG MVSIGNRKRS ARLQCGTYKE SGACTNSRKV NRDAVEAAVF AGLKDELSNP
IAITEYIKAY NDERRRLARE ASDQMSKLTR RNAEVSRELE RLIDAITQGV DLATLVPRIK
ELEIERADID GKLKCANEAD MVTLHPATIE QYRADVERLA DLAAEHSDFV ESAELIEALR
RLVAGVIVHA EPYGRGFNVE VQGRLAQLTN SDLFPTRSDG GGISGSGRGT RTPDPRIMIP
VL
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