Gene RPC_0934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0934 
Symbol 
ID3969736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1032607 
End bp1033131 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content69% 
IMG OID637924050 
ProductNADH ubiquinone oxidoreductase, 20 kDa subunit 
Protein accessionYP_530823 
Protein GI90422453 
COG category[C] Energy production and conversion 
COG ID[COG3260] Ni,Fe-hydrogenase III small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGATC AGTTGTTTCA GGGCCTATTC CGGCGTCCGC ACACCGAGCC GGCGCCGGCG 
CTGGATCCGG CCGCGGTGGA AGAACTCGCG ACCTCGCTCG GCGACCTGGC GCGGCGCCGG
CTCGGCCGCA GTCTGTCGAT CCGCGAGGTC GATGCCGGTT CCTGCAACGG CTGCGAATTG
GAAATCCACG CGCTCAGCAA CGCCTATTAC GACGTCGAGC GGTTCGGCAT CCGCTTCGTC
GCCTCGCCGC GCCATGCCGA CGTGCTGCTG GTCACCGGGC CGGTGACCAA GAACATGCGT
GACGCGTTGA AGGCCACCTA TGAGGCGACG CCTTCGCCGA AATGGGTGGT GGCGCTCGGC
GATTGCGCCA AGGACGGCGG CTGTTTCGCC GCCAGCTACG CGGTGGAGGG CGGGGTATCG
GCGGTGATTC CGGTCGATCT GCACATTCCC GGCTGTCCGC CGCCGCCGCT GCTGATCCTG
CAGGGGCTGC TGGCGTTGCT GGCCCGCGCC GACGCAGGGG CGTGA
 
Protein sequence
MRDQLFQGLF RRPHTEPAPA LDPAAVEELA TSLGDLARRR LGRSLSIREV DAGSCNGCEL 
EIHALSNAYY DVERFGIRFV ASPRHADVLL VTGPVTKNMR DALKATYEAT PSPKWVVALG
DCAKDGGCFA ASYAVEGGVS AVIPVDLHIP GCPPPPLLIL QGLLALLARA DAGA