Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0932 |
Symbol | |
ID | 3969734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1029622 |
End bp | 1031073 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637924048 |
Product | hydrogenase 4 subunit F |
Protein accession | YP_530821 |
Protein GI | 90422451 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.187708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTTC CCGGGTTCAA TCCGGTGCTC GGCGTGGTGC TGATCCCGAT CTTTGCCGCG GCGCTGCTGG CGGCGTTGCC CGGCTATCGG CTGACCGCGC GGCTCAACGT GGTGGCTTGC CTGGCCACCT TCGTCTGCGC GGTGTCGTTG CTGATCCTGC CGCGGCCGAC GCCGGGACCC TATGTGCTGG TCGACGACCT CAACATCGTG TTCATCGTGC TGAATTCGTT CGTCGGGCTG ACCACCAGCC TGTTCAGCGC CAGCTACATC GCCCACGAGT TGGAGACCGG CCGGCTGACC CCGGCTTACC TGCGGTTCTA CCACGCGATG TACCAGACCA TGATGTTCGG CATGAATCTG GCGTTCATGT CGAACAATAT CGGCCTGATG TGGGTGGCGG TCGAAGTCGC GACGCTGACC ACGGTGCTGA TGGTCGGCAT CTATCGCACC GAGGCGGCGC TGGAAGCCGC CTGGAAATAT TTCATCCTCG GCAGCGTCGG CATCGCCTTT GCGCTGTTCG GCACCATCCT GGTCTATATG GCGGCGCGCC CGATCATCGG CGAGGGCCAG GACGCCATGA TCTGGACGCT GCTGATCGAG CGCGCCTCGC AGTTCGATCC CGCCTTGCTC AACGTCGCCT TCGTGTTCCT GTTTCTCGGC TACGGCACCA AGGTCGGGCT GGCGCCACTG CACGCCTGGC TGCCGGACGC CCACGCCGAG GGTCCGACGC CGATCTCCGC GGTGCTGTCC GGGCTGTTGT TGAACGTGGC GCTGTACGCG CTGCTGCGCT TCAAGATGCT GATGACCGCC AATCCCGAGG CGATGGCGCC GGGCACGCTG ATGGTGACGA TGGGGCTTAC GTCGCTGATC TTCGCCGCCT TCATGCTGTA CCGCCGCCGC GACATCAAAC GGCTGTTCGC CTATTCGTCG ATCGAGCACA TGGGCATCAT CGTGTTCGCG TTCGGGATGG GCGGGCCGCT GGCGAATTTC GCAGGTCTCT TGCACATGGT GATGCACAGC CTGACCAAGT CGGCGATCTT CTTCGCGGTC GGCCACATCG CGCAGATCAA GGGCACCCAG ACCATCGATG AAATCCGCGG CATCACCGAG AGCCATCCGG CGCTGGGCTG GGGTTTCGTC GCCGGCGTGG TGGCGATCGC CGGGCTGCCG CCGCTCGGCA TCTTCATGAG CGAGTTTCTG GTGGTGAGTT CGACCTTCGC GCGGCAGCCG CTGTTGGCGC TGCTGTTGGT GTTCGGGCTG TTGGTGGCGT TCGGCGCGCT GACGCTGCGG CTGACCGGCG TCGCCTTCGG CGAGCCGCGC GGCAGTACGC AGCCCGCCGA GGCGTCGTAT CTGCCGATGT TCGCCCATCT GGTGCTGGTA TTGGTCGCCG GCGTGTATCT GCCGGCGCCG ATCGTGGTCT GGTTCCAGCA TGTCGCCCAC CTTCTCGGAT AA
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Protein sequence | MTLPGFNPVL GVVLIPIFAA ALLAALPGYR LTARLNVVAC LATFVCAVSL LILPRPTPGP YVLVDDLNIV FIVLNSFVGL TTSLFSASYI AHELETGRLT PAYLRFYHAM YQTMMFGMNL AFMSNNIGLM WVAVEVATLT TVLMVGIYRT EAALEAAWKY FILGSVGIAF ALFGTILVYM AARPIIGEGQ DAMIWTLLIE RASQFDPALL NVAFVFLFLG YGTKVGLAPL HAWLPDAHAE GPTPISAVLS GLLLNVALYA LLRFKMLMTA NPEAMAPGTL MVTMGLTSLI FAAFMLYRRR DIKRLFAYSS IEHMGIIVFA FGMGGPLANF AGLLHMVMHS LTKSAIFFAV GHIAQIKGTQ TIDEIRGITE SHPALGWGFV AGVVAIAGLP PLGIFMSEFL VVSSTFARQP LLALLLVFGL LVAFGALTLR LTGVAFGEPR GSTQPAEASY LPMFAHLVLV LVAGVYLPAP IVVWFQHVAH LLG
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