| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0907 |
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| Symbol | |
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| ID | 3969787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1003629 |
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| End bp | 1005860 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637924023 |
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| Product | pseudouridine synthase Rsu |
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| Protein accession | YP_530796 |
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| Protein GI | 90422426 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGCG ATAACGACAA AAACAACGGC CCCGCGCGCG GCCGGCGCGA CCGCCCCTCG
GGCGGCAAGG GCGCAGCCGG CCACAAGGGC CGCTCCGGCG CCGCGCGCGG CCCGGAAAAG
AAATTCGCCA AGCGCGCCGG CGCCACCGAC GGCGCGTTCG GCGGCGAGAA GAAAAGCTTC
GGCAGCAAGC CCTATGCCGG CCCCGGCAAG CCCTATGCCG GCAAGCGCGA AGGCCCGCCG
CCGCGACGCG ACGACGACCG CGCGCCGCGC CGGGATTTTT CCGATGCGCC GCGTCCGCGT
TTCAACAAGG ATGACCGCCC CGCCCGCAGC GGCGGCGACC GGCCCGATCG CGGGCCGCGC
AAGGAGTTCG GCGAGAAGCG CGCCTATGCG CCGCGCGAAG GCGGCGGCGA GAAGCGGCCC
TACACGCCGC GCGGTGAAGG CGGCGGCGAC AAGCGACCTT ACAGTCCGCG GCCGCCGCGC
GAGGGCGGCT ACGAGAAACG CCCCTACACC CCGCGCGGCG ATGCGCCGCG CGGCGAGCGT
TCGAACTTCA ACGATCGCGG CCCGCGGCAG GATCGCGGCG GCGATGCCCG CCCGGCGCGG
TTCTCCGACA AGAAGTTCGG CGACAAGCGC CCCTACACCC CGCGCGAAGG CGGCGGCGAG
AAACGACCCT ATACGCCGCG CGGCGAAGGC GGCGGCGACA AGCGGCCGTA TAGCCCGCGA
CCGTCGCGCG ACGGCGATCG TCCGTTCAGC GCGCGGCCGC AAGGCGAGCG CAAATTCGGC
GGCGAGAAAA AATTCGGCCG CGGCGCGCCG GATCGCGGCC CGCGCAAGGA GTTCGGCAGC
CGGCCGGATC GCGGCGCCGA TCGCGGCGAG GCCAAGCCGT GGCAGAAGCG CGACGCCTCC
GCGCCGGATC ACGTCGGCCG CAATGCGCGG CCCGCCCGCG ACGGCGCGAG GAATTTCGAC
AGGCCGGATT TCGACAAGCC GCGGTTCGAT CGCCCGCGCG AGGAAGGTTC CAGCGGGGAA
CGTCCCCGCT TCTCGCGGCC GCGCGAAGAC CGTCCGAAGT TCGATCGTCC GCGCGAGGCG
CGCAGCGCCT GGCAGGAGCA TCCGCGCTCT GAGCCGAGCG AGGCCGGAGA GCGGCCGCGC
CGCGACAACG AAGACGACAG CAAGGTGTTT GCCAAGCGGC CGGCGTTCGG CGGCCGCGGC
GCGTTTCGCG AGCGCAAGCC GGACGAGCGC CGTCCGCCGC GCCCGCCGGC GCCGAAGAAG
GCCGGCGAAC GGATCGCCAA GGTGGTGTCG CGCGCTGGCC TTTGCTCGCG CCGCGACGCC
GAGGAGTGGG TCACGCAGGG CCGCGTCGCG GTCAACGGCC GCATCATCAA TTCGCCGGCG
CTGGACGTGA CGACCCGCGA CGTCATCACC GTCGACGGCA AGCCGTTGCC GCTGCCGGAG
CGCACGCGCC TCTTCATGTA TCACAAGCCG CGCGGGCTGA TGACCACCCA CGCCGATCCG
GAAGGCCGGC CGACCGTGTT CGACCATCTG CCGGACGGCC TGCCGCGGCT GATCTCGATC
GGCCGGCTGG ATTTCAACAC CGAGGGCCTG CTGCTGCTCA CCAATGACGG TGGCCTCGCC
CGCACGCTGG AATTGCCCGA CACCGGCTGG CTCAGGCGCT ACCGCGTCCG CGCCCATGGC
GAGGTGACGC AGGGCCAGCT CGACGAGCTG AAGAAGGGCG TCGAGGTTGA CGGCGTGAAA
TACGGCTCGA TCGACGCCAC GCTGGAGCGC GACCAGGGCG CCAATGTCTG GCTGGTGTTC
GCGATCCGCG AAGGCAAGAA CCGCGAAGTC CGCAACGTCT TGGCGCATCT CGGGCTCGAG
GTGAACCGGC TGATCCGGGT CTCCTACGGC CCGTTCCAGC TCGGCGAGCT GGAAGAAGGC
CAGGTCGAGG AGGTAAAGAC GCGGGTGTTG CGCGAACAGC TCGGCGAGAA GATCGCCGCC
GCCTCCGGCG CTGACTTTGC AAGGCAGATT CCCAGCAAGG GCGACGTCGA TCTCGATCCG
GTGGTGGTGA AGAAGCCGGT CTACAAGCGC GGCACCGTGG AGGACCGCAA GGGCCGCCGC
GTGCTGGTGC AGCGCACCGG CAGCGAGGAA GCCCGCGCCC GCAACGAGGC CGAAGCCAAC
GGCTACGGCC CGCCGCGCCG CCCGACCCGC GGCTACAAGG GCAAGCGCGA CCTCAAGCCG
CGCGACGAGT GA
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| Protein sequence | MPRDNDKNNG PARGRRDRPS GGKGAAGHKG RSGAARGPEK KFAKRAGATD GAFGGEKKSF
GSKPYAGPGK PYAGKREGPP PRRDDDRAPR RDFSDAPRPR FNKDDRPARS GGDRPDRGPR
KEFGEKRAYA PREGGGEKRP YTPRGEGGGD KRPYSPRPPR EGGYEKRPYT PRGDAPRGER
SNFNDRGPRQ DRGGDARPAR FSDKKFGDKR PYTPREGGGE KRPYTPRGEG GGDKRPYSPR
PSRDGDRPFS ARPQGERKFG GEKKFGRGAP DRGPRKEFGS RPDRGADRGE AKPWQKRDAS
APDHVGRNAR PARDGARNFD RPDFDKPRFD RPREEGSSGE RPRFSRPRED RPKFDRPREA
RSAWQEHPRS EPSEAGERPR RDNEDDSKVF AKRPAFGGRG AFRERKPDER RPPRPPAPKK
AGERIAKVVS RAGLCSRRDA EEWVTQGRVA VNGRIINSPA LDVTTRDVIT VDGKPLPLPE
RTRLFMYHKP RGLMTTHADP EGRPTVFDHL PDGLPRLISI GRLDFNTEGL LLLTNDGGLA
RTLELPDTGW LRRYRVRAHG EVTQGQLDEL KKGVEVDGVK YGSIDATLER DQGANVWLVF
AIREGKNREV RNVLAHLGLE VNRLIRVSYG PFQLGELEEG QVEEVKTRVL REQLGEKIAA
ASGADFARQI PSKGDVDLDP VVVKKPVYKR GTVEDRKGRR VLVQRTGSEE ARARNEAEAN
GYGPPRRPTR GYKGKRDLKP RDE
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