Gene RPC_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0879 
Symbol 
ID3969798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp969456 
End bp970193 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content68% 
IMG OID637923995 
Productglutamine amidotransferase class-I 
Protein accessionYP_530768 
Protein GI90422398 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTTC TGGTCTTTCA GCACATTGAT ATCGAGCACC CCGGGATTTT CCGCGAATTC 
TGGCGGGCCG ACGGCATTGC CTGGGATGCG GTCGAGCTCG ACGAGGGTGA TCCGATCCCG
GAGCTCGAGG CCTATGACGC TCTGGTGGTG ATGGGCGGCC CGATGGACGT CTGGCAGGAG
GTCGAACATC CCTGGCTGGT GACGGAAAAG GCCGCGATCC GCCGTTTCGT TCGCGAGCTG
AACCGGCCCT ATCTCGGCAT CTGTCTCGGT CACCAGCTGT TGGCCGACGC GCTGGGCGGG
GCGGTGGCGC TCGGCAACAC CCCGGAGGTC GGGCTGGGCC GCGTGGAACT GACCGCGGCC
GGGCTGCAAG ATCCGCTGTT CGCGGGGTTC GCCAATCCGG TCGAAACCTT CCAATGGCAC
GGCGCCGAAG TGACTCGGCT GCCGGAGGGC GCCGAGCTGT TGGCGGGCAA CGCCGCCTGC
GCGGTGCAGG CGCTCCGGGT CGGTTCGTCG GCCTATGGGG TGCAGTACCA CGTCGAAATC
ACCGAACAGA CGGTGCCGCA ATGGCGCGAA TTACCCGCTT ATGCCGCATC GCTCGACACC
GCTCTCGGGC CGCAGCGCGC CGCCGGGCTT GCGGCGGAGA CCGCCGCACG GCTGCCGGCC
TTCGCCACCG CCGCGCGACG CTTCAATGAC AACTTCCTGC GCGTCGTTGC GGCCTCGCGC
ACGACAAGCG TTGGATAG
 
Protein sequence
MRFLVFQHID IEHPGIFREF WRADGIAWDA VELDEGDPIP ELEAYDALVV MGGPMDVWQE 
VEHPWLVTEK AAIRRFVREL NRPYLGICLG HQLLADALGG AVALGNTPEV GLGRVELTAA
GLQDPLFAGF ANPVETFQWH GAEVTRLPEG AELLAGNAAC AVQALRVGSS AYGVQYHVEI
TEQTVPQWRE LPAYAASLDT ALGPQRAAGL AAETAARLPA FATAARRFND NFLRVVAASR
TTSVG