Gene RPC_0839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0839 
Symbol 
ID3969836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp926156 
End bp926896 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content66% 
IMG OID637923955 
ProductABC transporter related 
Protein accessionYP_530728 
Protein GI90422358 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.211901 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGG TGCTGGAAGT CCGCGGGCTC GGCGTCCGCT TCGGCGGCAT CCGCGCCGTC 
GACGGCGTCT CGTTCGACGC CGAATCCAAT GCCATCACCA CCATCATCGG CCCCAACGGC
GCCGGCAAAT CCACGCTGTT CAATCTGATC AGCGGCATGA TCCGGCCGAG CTCCGGCAAG
GTCATGCTGC GGGGCGTCGA TCTGACGGGG CGGCCGCCCT ATCTGATGCA GCGCGCCGGG
ATGGGGCGTT CGTTCCAGAT CACCAATCTG TTCTTCGAGC TCACCGTGTT CGAAAACCTG
CGGCTGGCGG CCCAGCGCCT CGAAACCACC GGGCGGTTTC TGCTGCCGGT CTCGCGCAGC
GAACGAGCGT TGTCGCGGGT GCATGAACTG GTCGACCGCT TCGCGCTGGG GCCGAAAGCC
GGCGAGCTCG CCGGCGCGCT GTCGCACGGC GAACAGCGCC GGCTCGAGAT CGCGGTGGCG
CTCGCCACCG AGCCCAGCAT CCTGTTGCTG GATGAGCCGA CCCAGGGGAT GAGTCATTCC
GACACCGCCG ACACCGCAGC GCTGATCCGC GATCTGGCGC GCGACGTTAC TATTTTGTTG
ATCGAACACG ACATCGGCGT GGTGATGGAT ATCTCCAACC ACATCGTGGT GATGCATCAA
GGCCGCAAGC TCGCCGAAGG CGCGCCAGCG GTGGTGCGGG CCGATCCCGC GGTGAAGTCA
GCTTATTTCG GGCACGCATG A
 
Protein sequence
MSVVLEVRGL GVRFGGIRAV DGVSFDAESN AITTIIGPNG AGKSTLFNLI SGMIRPSSGK 
VMLRGVDLTG RPPYLMQRAG MGRSFQITNL FFELTVFENL RLAAQRLETT GRFLLPVSRS
ERALSRVHEL VDRFALGPKA GELAGALSHG EQRRLEIAVA LATEPSILLL DEPTQGMSHS
DTADTAALIR DLARDVTILL IEHDIGVVMD ISNHIVVMHQ GRKLAEGAPA VVRADPAVKS
AYFGHA