Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0839 |
Symbol | |
ID | 3969836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 926156 |
End bp | 926896 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637923955 |
Product | ABC transporter related |
Protein accession | YP_530728 |
Protein GI | 90422358 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.211901 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTGG TGCTGGAAGT CCGCGGGCTC GGCGTCCGCT TCGGCGGCAT CCGCGCCGTC GACGGCGTCT CGTTCGACGC CGAATCCAAT GCCATCACCA CCATCATCGG CCCCAACGGC GCCGGCAAAT CCACGCTGTT CAATCTGATC AGCGGCATGA TCCGGCCGAG CTCCGGCAAG GTCATGCTGC GGGGCGTCGA TCTGACGGGG CGGCCGCCCT ATCTGATGCA GCGCGCCGGG ATGGGGCGTT CGTTCCAGAT CACCAATCTG TTCTTCGAGC TCACCGTGTT CGAAAACCTG CGGCTGGCGG CCCAGCGCCT CGAAACCACC GGGCGGTTTC TGCTGCCGGT CTCGCGCAGC GAACGAGCGT TGTCGCGGGT GCATGAACTG GTCGACCGCT TCGCGCTGGG GCCGAAAGCC GGCGAGCTCG CCGGCGCGCT GTCGCACGGC GAACAGCGCC GGCTCGAGAT CGCGGTGGCG CTCGCCACCG AGCCCAGCAT CCTGTTGCTG GATGAGCCGA CCCAGGGGAT GAGTCATTCC GACACCGCCG ACACCGCAGC GCTGATCCGC GATCTGGCGC GCGACGTTAC TATTTTGTTG ATCGAACACG ACATCGGCGT GGTGATGGAT ATCTCCAACC ACATCGTGGT GATGCATCAA GGCCGCAAGC TCGCCGAAGG CGCGCCAGCG GTGGTGCGGG CCGATCCCGC GGTGAAGTCA GCTTATTTCG GGCACGCATG A
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Protein sequence | MSVVLEVRGL GVRFGGIRAV DGVSFDAESN AITTIIGPNG AGKSTLFNLI SGMIRPSSGK VMLRGVDLTG RPPYLMQRAG MGRSFQITNL FFELTVFENL RLAAQRLETT GRFLLPVSRS ERALSRVHEL VDRFALGPKA GELAGALSHG EQRRLEIAVA LATEPSILLL DEPTQGMSHS DTADTAALIR DLARDVTILL IEHDIGVVMD ISNHIVVMHQ GRKLAEGAPA VVRADPAVKS AYFGHA
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