Gene RPC_0801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0801 
Symbol 
ID3969873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp885986 
End bp886993 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content67% 
IMG OID637923917 
Producthypothetical protein 
Protein accessionYP_530691 
Protein GI90422321 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.61408 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAAG GCTCCCACTC TGCGATCGAC GTCGCGTTCA ACAAGCTGTC GTCGCCGCGG 
ATCTTTTTGA TCCGAATGCT GGTGTTTCTG GTGCTTTGCG GGCTGCTGCT GGTGGTGCTG
TACAAGCAGA TCATCGTCGC CTTCTTCGCC AATCCCGGGC TCAACGCGCT GATCGGGGCG
GTGCTGCTGA TCGGCATCGT GCTGTCGTTC CGCCAGGTGA TTCGGCTCTA TCCGGAGGTC
GCGTGGGTCA ATAATTTCCG CATCGCCGAT CCGGGGCTGG CGCTGGCGCA GCGGCCGACC
CTGCTGGCGC CGATGGCGGC GATCCTCGGC GGCGAACGCA GCGGCCGGAT GTCGATCTCG
CAGCAGACCA TGCGGCATCT GCTCGACTCG ATCGCCACCA GGCTGGATGA GGCCCGCGAC
ATCTCGCGCT ACATGACCGG GCTGTTGGTG TTTCTCGGCC TGCTCGGCAC CTTCTGGGGG
CTGATCGAAA CCGTCGGCTC GGTCGGCAAG GTGATCGAGG GCTTGAAGGT CGGCGGCGAC
GCCGGCTCGT TGTTCGACAC GCTGAAGGAA GGCCTCGCCG CACCGCTCGG GGGCATGGGC
ATCTCGTTCT CCTCGTCGCT GTTCGGGCTC GCCGGCTCGC TGATCCTCGG CTTCCTCGAT
CTGCAATCCA GCCAGGCGCA GAACCGGTTC TACACCGACC TCGAGGACTG GCTCGCCTCC
ACGGTGCGCG AATATGTCGG CGACGGCGCC GGCACCGCGG TCGGAGCCGC TGCCGGCGGC
GCCGACTTGC AGGGCGCGAT CGAGCGGCTG CGCCGAGCGT TCGAAGACGG CTCCAGCCGC
GGCACCACCG CGGCGATGGC CAACCTCGCC GACGCGATCC AGAGCCTGGT CGCGCATATG
CGCAGCGAAC AGCAACTGAT CCGCGAATGG GCCGACGGCC AGGGCGAGCA GAACCGCGAG
ATCAAGGCGC TGCTGCAGCA CCTCGCGCGG CAACCGGAGA AGAGTTAG
 
Protein sequence
MAQGSHSAID VAFNKLSSPR IFLIRMLVFL VLCGLLLVVL YKQIIVAFFA NPGLNALIGA 
VLLIGIVLSF RQVIRLYPEV AWVNNFRIAD PGLALAQRPT LLAPMAAILG GERSGRMSIS
QQTMRHLLDS IATRLDEARD ISRYMTGLLV FLGLLGTFWG LIETVGSVGK VIEGLKVGGD
AGSLFDTLKE GLAAPLGGMG ISFSSSLFGL AGSLILGFLD LQSSQAQNRF YTDLEDWLAS
TVREYVGDGA GTAVGAAAGG ADLQGAIERL RRAFEDGSSR GTTAAMANLA DAIQSLVAHM
RSEQQLIREW ADGQGEQNRE IKALLQHLAR QPEKS