Gene RPC_0757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0757 
Symbol 
ID3969982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand+ 
Start bp834262 
End bp834888 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content69% 
IMG OID637923872 
Productputative phage repressor 
Protein accessionYP_530647 
Protein GI90422277 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.418938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.361734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCC ACGACCAGAT CTGGACCGCG TTGGACCGCC TGGCGGAGCG CGCCGGGCTC 
TCGCCGTCAG GCCTCGCCAA ACGCTCCGGG CTCGATCCCA CCACCTTCAA CAAATCGAAA 
CGCATCACCA ATGACGGCCG CGAGCGCTGG CCCTCGACCG AATCGGTGGC CAAGGCGCTG 
GCGGCGACCA ACACCGCGAT CGACGCCTTC GTGCAGCTGA TCGGCGACGG CCCGCGCGCG 
GTGCAATCGG TGCCGCTGCT CGGTCTGGCG CAGGCCGGCT CCGGCGGCTA TTTCGACGAC 
GGCGGCTTTC CGGTCGGCAA GGGCTGGGAC GAGGTCGGGC TGCCCTCGGT CAACGACGAG 
CACGCCTATG CGCTGGAGAT TTCCGGCGAC TCGATGAAGC CGGCGTATCG CGCCGGCGAC 
GTCATCGTGG TGTCGCCGGG CTCGCCGATC CGGCGCGGCG ACCGCGTCGT GGTGAAGACC 
CGCGACGGCG AGGTGATGGT CAAGGAGCTG AAGCGGCGCA CCGCCAAGAC CTTGGAATTG 
CTGTCGCTCA ACCCGAGCCA TCCCGATCGC ACGCTGGCGC CGGCCGAGGT CGAATGGATC 
GCCCGGATCG TCTGGGCCAG CCAATAG
 
Protein sequence
MLTHDQIWTA LDRLAERAGL SPSGLAKRSG LDPTTFNKSK RITNDGRERW PSTESVAKAL 
AATNTAIDAF VQLIGDGPRA VQSVPLLGLA QAGSGGYFDD GGFPVGKGWD EVGLPSVNDE 
HAYALEISGD SMKPAYRAGD VIVVSPGSPI RRGDRVVVKT RDGEVMVKEL KRRTAKTLEL 
LSLNPSHPDR TLAPAEVEWI ARIVWASQ