| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0748 |
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| Symbol | |
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| ID | 3969973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 824379 |
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| End bp | 825722 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637923863 |
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| Product | putative outer membrane protein |
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| Protein accession | YP_530638 |
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| Protein GI | 90422268 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.272117 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTA TTCTCGCCGG CGTCGCGCTT ATCGGAACGG CCGTGAGTGC CCAAGCAGCC
GACCTGGCCA CCAAGGCCCC GTATTACAAA GCGCCGATCG TTGCGGTGTA CGACTGGACC
GGCTTCTACG TCGGCGTCAA CGCCGGCGCC GGCCTCGGCC GCGACCGCGC GATCCAGAAC
TTCGCTCCCG GCCTGACCAG CACCACCTAT CTGCAGCCGT TCGGCGCGCT GGGTGGCGGC
CAGATCGGCT ACAACTACCA GACCAATTCG CTGTTTGGCC CGCTGGTGAT CGGCCTCGAA
GGCGATTTCC AGGGCGCCGA CCTCAGCGAC ACCCGCACCA CACTGTCGGG TCCGGTGAAT
TACAGCCAGA AGCTCGATTG GTTCGCCACC GCCCGCGGCC GCATCGGTAT CGCCCGCGGT
CCGGTGCTGA ACTACTTCAC CGGCGGTTTC GCGGCCGGCG ACGTGCGGAC CACCGTCACC
GAGGGCGGCT TCACCGCGTT CGACAGCGGC AAGCGCACAC TGACAGGCTG GACCATCGGC
AGCGGCGTCG AAGCGGCGCT GGGCGGGAAC TGGACCGGCA AGATCGAATA TCTCCACCTC
GATCTTGGCA ACAAGACCGA CAGCTTCCTC GGCCAGACCC TGCAGACCAG CGTGCGTGAG
AACATCTTCC GCGTCGGCCT GAACTATCGC ATCGGCGGCA ACGGGCTGTA CGCGCCGGCG
CCGGTCGCGA ACTGGACCGG CTTCTATCTG GGCGGCAATT TCGGCAGCGC CTTCGCGCGC
AACCGCACCA CCGCTTCCAT CGGTCCCTTC AGCGAACAGT TCAACCTCGG GCTCGACGGC
TTCGCCGGCG GCGGCCAGGT CGGCTACAAC TGGCAGGCCT CGAACTGGGT GTACGGCCTC
GAAGCCGACT TCCAGGGTTC GACCCAGCGT GACAACGACA CCGCGGTGTT GTTCGGCCTT
GCCGCCTACG ACGCCAAGCT GCCCTGGTTC GGCACCGTGC GCGGCCGGCT CGGCTACTCG
CTCGGCTCGA CGCTGTTCTA CGGCACCGGC GGTTACGCCT ACGGCAACGT CAAGACCACC
ATCACGGCGG GCACCGGCAG CGAGACGATC TCGAAGACCG CGAGCGGCTG GACCGCCGGC
GCGGGCATCG AAACCCCGTT CACGCTGCTC GGCCTGGTCG GTCCGAACTG GACCTCGAAG
ACCGAATATC TCTATGTCGA CCTCGGTTCG ACCACCAGCG ACTTTGCCGG CGGCTTGGCG
CCCAACACCA TCAAGGTCAC CGAACACATC TTCCGAACCG GCATCAACTA TCACTTCAAT
TCGCCGGTGG TCGCCAAGTA CTGA
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| Protein sequence | MKRILAGVAL IGTAVSAQAA DLATKAPYYK APIVAVYDWT GFYVGVNAGA GLGRDRAIQN
FAPGLTSTTY LQPFGALGGG QIGYNYQTNS LFGPLVIGLE GDFQGADLSD TRTTLSGPVN
YSQKLDWFAT ARGRIGIARG PVLNYFTGGF AAGDVRTTVT EGGFTAFDSG KRTLTGWTIG
SGVEAALGGN WTGKIEYLHL DLGNKTDSFL GQTLQTSVRE NIFRVGLNYR IGGNGLYAPA
PVANWTGFYL GGNFGSAFAR NRTTASIGPF SEQFNLGLDG FAGGGQVGYN WQASNWVYGL
EADFQGSTQR DNDTAVLFGL AAYDAKLPWF GTVRGRLGYS LGSTLFYGTG GYAYGNVKTT
ITAGTGSETI SKTASGWTAG AGIETPFTLL GLVGPNWTSK TEYLYVDLGS TTSDFAGGLA
PNTIKVTEHI FRTGINYHFN SPVVAKY
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