| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0712 |
|---|
| Symbol | |
|---|
| ID | 3970573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 781118 |
|---|
| End bp | 781915 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637923828 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_530603 |
|---|
| Protein GI | 90422233 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.159278 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0660006 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCCA TCTATCGCAT CGACGGTGCC AACGTCATCA CCCGGCGCTA TGCGGCGGGG
CCCTGGCATC CGACCATGCA GCACGGCTCG CCGCCCTCGG CGCTGGTGAC GTTTCTCGCC
GAGCAGATCC CGACGCGCGA GCCGATGCAG ATCGTGCGGT TGACCATCGA CCTGATGCGC
CCGGTGCCGG TGGCGCCTCT GAGCTTCGAG ACCGAAGTGC TGCGCGAGGG CCGCAAGATC
CAGCTCTGCG CGGTGCGGCT CAAGGCCGAG GGCGTGGTGG TGGTCAGCGC CACGGTGTTG
AAGGTGATCA TCGGCACCCC GGCGCTGCCC GACGACATCG CGCATCCGCC GATCGACGTG
CCGCCGCCCG AGCAGGGCCG CCCGCTGCAG ATGCGCCATG ACAACAACCC GTTCATCGGC
TGCGTCTCGG TGCGTGAAGT ACACGGCGGC TTTCTGTCGC TGGGGCCCGG TGCGATCTGG
TACCGGCTCG ACCGGCCGAT GATCGAGGAC CAACCCACCT CGCAGGTGAT GCGGGCGGCG
ATCGCGGCGG ATTTCAGCAA CGCCACCTCG GCGGTGCTGG ATTTCAAGGA CTGGACCTTC
ATCAACGCCG ACCTCAGCAT CAACCTGGCG CGGCCGCCGG TCGGCGACTG GATCCTGCTC
AATTCGGAGA TGTGGATCGG CGCCGATGGC GCCGGCATCG CCGCCTCAAA GCTCGGCGAC
GTCAACGGCT ATTTCGGCCG CGCGGTGCAG AGCCTGGTGA TCGAGCAACG CCAACCGGAA
TCGGCCGCGG CGAGTTAA
|
|---|
| Protein sequence | MEAIYRIDGA NVITRRYAAG PWHPTMQHGS PPSALVTFLA EQIPTREPMQ IVRLTIDLMR
PVPVAPLSFE TEVLREGRKI QLCAVRLKAE GVVVVSATVL KVIIGTPALP DDIAHPPIDV
PPPEQGRPLQ MRHDNNPFIG CVSVREVHGG FLSLGPGAIW YRLDRPMIED QPTSQVMRAA
IAADFSNATS AVLDFKDWTF INADLSINLA RPPVGDWILL NSEMWIGADG AGIAASKLGD
VNGYFGRAVQ SLVIEQRQPE SAAAS
|
|---|
| |