Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0704 |
Symbol | |
ID | 3970565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 769663 |
End bp | 774735 |
Gene Length | 5073 bp |
Protein Length | 1690 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637923820 |
Product | pyruvate flavodoxin/ferredoxin oxidoreductase-like |
Protein accession | YP_530595 |
Protein GI | 90422225 |
COG category | [C] Energy production and conversion |
COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.311885 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.460699 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAG CGTCGTTCGC AATTGCGAAG CGGCGATCGC GGCTCGTTCA GTTGGCAATA AATAAGAATG GACGGACGGC AATGAACGCA AAATATCCCG GCATCTCGAC AGTGATCCAC GGTAACGGCG CCGTCGCCCA GGTGATGGGC CATGTCTGCG GCGGCGTGAT CGGCTACCCG ATCACCCCCT CGACCGAAAT TTCCGAGATC TACGAGGCGT TCCGCTCCTC CGGCGGCTGC AACGTCTTCG GCAAGCACCC GTTCTTCTTC GAGCCCGAGG GCGAGCATTC GGCGCAGTCC GGCGCGCTCG GCGCCTCCTT GACCGGCGGC AAGTTCGTCT CCAACGCCTC CTCCAGCCAG GGCATCCTGT ACGGCCTGGA ATCGCACTAC GTGACGGTGG GCAAGAAGGT CGGCGGCTTC GTGCTGCAGG TCGCCGCCCG CGTGGTGTCG AAGCATTCGC TCAACGTGAT GGCCGGCCAT GACGACGTCT ATGCGCTGCT GTCGTCGGGC TACACCATCC TGTTCGGCTC CAACCCGCAG CAGGCCGCCG ATCTCGCGGC GATCTCCTAT AAAGTCAGCG CCACCTCGCT GATCCCGGTC GCCAACGCGA TGGACGGCTT CGCCACCTCG CACATGCTCA GCGAAGCCCT GATGCCGGAG CCGGAATTGC TGCGCGAATT CCTCGGCGAC CCGGCCGGCC GCATCAAGTG CCCGACCGTC GCTCAGGAGA TGCTGTTCGG CGCCAAGGGC CGGGTGTTCC AGCTGAAGCA ATACCTCGCC CGCCACAAGG CGGATTTCAT CGGCTCCGAT CTCGACGCGC TGACCGCGCA TCTCGACGCG CACGCCGATG CCATCGAAAC CGACAACGAC GCGGCGCTGG TCGAAGCCAC CCAGCAATGG GTGCCGGAAG AGCTGCAGGG TCAGTGGAAG CGGCAGTGGG TCAACGCGCC CGAGAAGGGC ACCCGCCAAT TGGTGCCGGC GCTGGTCGAT ATCGACAATC CCGGCCTCAC CGGCGGCGTG CAGAACCAGC CGGACTTCCA GGCCGGCGCG GTCGATCACC GCACCCATTT CGCCAATGCG GTGCCGCACT TCGTCAAACA GGCGATGGAC GAATATTCAG CGCTGACCGG CCGCGAATAT AAGCCGGTGA TGAGCTTCAT GGCCGACGAC GCCGACCATG TGGTGGTGGG CTTAGGCTCG GTGACCGACG ACGCCGAGGC GGTGGCGAGC TATCTGCGGA GCAAAGGCAA GAAGGTCGGC GTGGTGTCGA TCAAATTGCT GCAGCCGTTC CCGGAAGGCG ATCTGGTCGC GGCCTTGGCC GGCAAAAAGT CCGTCACCGT GCTGGAGCGC TCGGAAGTCA CCGCGCTGAC CAGCTTGGTG ACGCAGGCGC TGTGCAAGGC GCGCGAGAAC GCCGACGGCG TCCGCCACGC CGGGATTCCG CCGATCAAGC AATTGCCGAA GCTCACCACC GCGATCTTCG GGCTCGGCGG CCACGACCTG CAGCCGCGCG ACATGATCGC CTGCTACGCC AACATGGAGA AGAAGGACTC CGCGCCGTTC GTCTATCTCG GCACGCAGTT CTTCACCAAG GATGCCTCGC CGCGGATGAC GGCGCTGCAG GATCGGCTGA AGGCGGCCTA TCCGGAAACC GAATTCATGG CGCTGCAGAC CGGGCAAAAC CCGAACCTGC TGCCGCCGCA GGCGTTCCGC ATCCGTTTCC ACTCGATCGG CGGCTACGGC ACCATCGCCT CCGGCAAGCT GTTGACCGAC ATTCTCGCCG GTGCGCTCGA CATGCACTCG AAGTCCGCGC CGAAATACGG TTCGGAAAAG AGCGGTGCGC CGACCAACTA TTACATCACG CTGTCGCCGG AGACAGTGAA AATCACCAAC GCCGAATTGG AAGACGTCGA GATCGTGATC TCGCCGGACC ACAAGGTGTT CATCCACACC AATCCGTTGC GCGGCCTGGT CGAAGGCGGC ACCTTCATCC TGCAGACCAA TCTGACGGCG CTCGAAGTCT GGCGCGAGCT GCCGGCCAAG ATCCGCGCCA CCATCCGTAA CAAGAAGATC AAGTTCTACG TGATCGACGC CTTCGCGGTC GCCAAGCGCC ACGCGCCGAC CGCCGAACTG GAAACCCGCA TGATGGGCAT CGCCTTCATC GGCGCGGTGT GCGGCAACGT CGATCGCGTG GTGGCGGACG CCTCGCAGGA AGCCATGCTG ACCAAGATCC GCCAGCAGAT CTCCAAGAAG TTCGGCGCCA AGGGCGGCGC GGTGGTCGAA GGCAACATGG CGGTGATCCG CGAAGGTGTC GAAGCCACTC ACAAGGTCGA CTACGACGCC CCCGACTTCG CCGAAAGCGC AATCGCCGCG GCGCCGAAGG CCAAGCGCGA CGCCTCGCTG TCGGCCTCGA TGTGCCGCGC CGCGGGCCCG GCCTCGGCCG CGGGCTTCCT CGATCCGGAA TATTACGACG ACGTGCTGGG CGCCCCGTTC CGCGACGGCA CCATCGCGGA TGCGCCGGTG CTGCCCGGCA TGGGCATGTT CATGCCGGCG GGCTCCGCCG CGATGAAGGA CAAGGGTCTG TTCCGCCGCA ACGTGCCGCA GTTCAACCCG GATCAATGCA CCGGCTGTCT GGAATGCGCG CTGGTCTGCC CGGACGCCGC GATCCCCAAC ACCGTGCACG ACATCCACGA GCTGATTGCC ACCGCGATCA AGCAGCTCGA TATCGCCCCG GCGCAGCGCG ACGCGCTCTC CGCGCAGGTC CGCGACCTCA GCGAAGCGGT GCGCGAGATC TATCGCACCA GCAAGGACAA CACCCCGTTC CATGCCATCG TGGCGCAGGC CGCGGCCTCG CTCGATATCG ACAACGCCAC CTTGAAGCGC AACCTCGGCA GGCTCGCAGC TGCCCTCGAA GTCTATCCGG TGGCGCGCAC CCGACCGTAT TTCGACGCCA TGGAGAAGGC GCAGCCGGGC TCCGGCGGGC TGTATTCGGT CTCGGTCGAT CCGTGGAAGT GCACCGGCTG TCTGGAATGC GTCGATGTCT GCGGACCCGG CGCGCTGGTC GATCGCGAAC AGGACGAGCC GCTGCTGGAG GAATTGCAGG CCCGGTTCGA ATTCTTCAGC CACACGCCGA ACACCCCGGC GCGGTTCGTC GACGGCGCCA CCCAGCCCGG CGGCGAGGCC AAGCGGCTGA TCCTCGACCG CGCCAATTAC TACGCCACCA CCGGCGGCCA CGGCGCCTGC CGCGGCTGCG GCGAGGTCAC GGCGATCCGG CTGGTCACCG CGACCAACCA CGCGCTGCAC GACAAGCGAC GCAAGGACCA CACCCGCGAG CTGGAAGCTT TGATCGGCGA ACTCACCGCC AAGCGCGACG CGGTGGCGGC GAAGGGCGAC GACGCGCCCC GGGTCGCACG GCTCGACCGC ACGCTGAAGA CGCTGGAAAA GCGGCTCTAT CTCTATGAGA GCGGCCCGAC CGGCAACGGC CCGGCCGGCA TGGTGATCGC CAACGCGACC GGCTGCTCCA GCGTCTATGC CTCGACCTTC CCGTTCAACC CCTACACCGA TCCGTGGGTC AACAGCCTGT TCCAGGATAC GCCGGCGGTC GCCAAGGGCA TCTTCGAAGG CCTCACCGCC ACCGCGTCGG AAGATTTCGC CGCGCTGCGC ATCGCCAGAC TGGAATTGCA GGACGCCTAC AATCCGGCCA AGCACGACAA TCAGTTCCGT TACTTCGGCT GGGCCTCGTT CACGCCGGAG GAACGCGCGC TGCTGCCGAC CGTGCTCAGC ATGGGCGGCG ACGGCGCCAC CTACGACATC GGCTTCGGCG CGCTGTCGCG GCTGTTGTCG ACCGCGACGC CGATCAAGGT GGTGGTGCTG AACACCGGCG CCTATTCCAA CACCGGCGGG CAGACCTCCA CGGCGAGCCT CACCGGCCAG GATTCCGACC TGTCGCGGTT CGGCGTCGCC AATACCGGCA AGCAGGAATC CCGCAAGGAG CTTGGCCTGA TCGCCTCGTT CCATCCCAAC GTATTCGTGG TGCAGACCTC GACCGCGCTG CAGGGCCACT TCCTGAAGAA CGTGCTGGAG TATCTCAACT ACAGCGACTC GCCGGCGGTG CTCGACGTCT ATACGCCGTG CCAGGCCGAG CATGGCATCG GCGACGCGGT CGCCAACCGC CAGGCCCGCA AGGCGGTGGA AAGCCGGATG AACCCGGTGT TCGTGCACGA CCCGCGCCGC GGCTCCAACC TGCACAGCGC GTTCTCGCTC GACGGCAACC CGGAGCCCGA TCAGGACTGG GCGGCGCAGT CGATCGAATA TGTCGACGAC AACGGCGCCA CCCAACTGCT CAAGACCGCG GTGACGCCGG CCGACTTCGC CTACACCGAG GTGCGCTTCA AGAAGCAGTT CAAGAAGCTA GCCGCCGACG CCGATGGCGT CGTGGTGCAG GACTATGTGG CGCTCAGCCC CGACCAGCGC GTCGGCAAGA CGCCGTTCAT CTACGCCACC GACGCCGACA AGCGGCTGAT CAAGCTTTCG GTCGGCGCCG CGGTGATCCG GCTGGTCGAG GAGCGGCGCA AATATTGGCG CACGCTGCAG TTCCTCAGCG GCCTCGACGT TCGCCAGATC GACGAGACCC ACCGCGTCGA ACTCGACGCG CTGCTGCGGC AATACGAAGA CTCGCTGAAG GCGCGGGAAA CCTCGCTGGA TTCGATCGCC CGCGGCATGA GCGAACTCGC CGCGTCGTCG AATGCACCCG CCGCCGGCGG CTTCGCCGGA CTGATGGCGG GGCTGGCCCC GGCCGCGGCG GCACCTGCCA CCAACGGCGC CAAGGCGCCG ATCACCAGCG GCAACGTGCC GATCACCATC TCCGAAGATG ATCTCGCCAA GTGCACCAAC TGCAAGAGCT GCTACCAGGA CGTCGGCGAG GTGTTCGAGC CGACCAAGAT CGTGGTCGAC GGCGTCACCA AGGACGTCGC CCATGTGATC CCGGGCGTGT TCGGCAAACT CAAGATTACG CCTGAACTGT CGGCCAAGCT GAGCCGGGCG GCGGCGAATT GCGACGCGGA GATCATCCGA TGA
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Protein sequence | MAEASFAIAK RRSRLVQLAI NKNGRTAMNA KYPGISTVIH GNGAVAQVMG HVCGGVIGYP ITPSTEISEI YEAFRSSGGC NVFGKHPFFF EPEGEHSAQS GALGASLTGG KFVSNASSSQ GILYGLESHY VTVGKKVGGF VLQVAARVVS KHSLNVMAGH DDVYALLSSG YTILFGSNPQ QAADLAAISY KVSATSLIPV ANAMDGFATS HMLSEALMPE PELLREFLGD PAGRIKCPTV AQEMLFGAKG RVFQLKQYLA RHKADFIGSD LDALTAHLDA HADAIETDND AALVEATQQW VPEELQGQWK RQWVNAPEKG TRQLVPALVD IDNPGLTGGV QNQPDFQAGA VDHRTHFANA VPHFVKQAMD EYSALTGREY KPVMSFMADD ADHVVVGLGS VTDDAEAVAS YLRSKGKKVG VVSIKLLQPF PEGDLVAALA GKKSVTVLER SEVTALTSLV TQALCKAREN ADGVRHAGIP PIKQLPKLTT AIFGLGGHDL QPRDMIACYA NMEKKDSAPF VYLGTQFFTK DASPRMTALQ DRLKAAYPET EFMALQTGQN PNLLPPQAFR IRFHSIGGYG TIASGKLLTD ILAGALDMHS KSAPKYGSEK SGAPTNYYIT LSPETVKITN AELEDVEIVI SPDHKVFIHT NPLRGLVEGG TFILQTNLTA LEVWRELPAK IRATIRNKKI KFYVIDAFAV AKRHAPTAEL ETRMMGIAFI GAVCGNVDRV VADASQEAML TKIRQQISKK FGAKGGAVVE GNMAVIREGV EATHKVDYDA PDFAESAIAA APKAKRDASL SASMCRAAGP ASAAGFLDPE YYDDVLGAPF RDGTIADAPV LPGMGMFMPA GSAAMKDKGL FRRNVPQFNP DQCTGCLECA LVCPDAAIPN TVHDIHELIA TAIKQLDIAP AQRDALSAQV RDLSEAVREI YRTSKDNTPF HAIVAQAAAS LDIDNATLKR NLGRLAAALE VYPVARTRPY FDAMEKAQPG SGGLYSVSVD PWKCTGCLEC VDVCGPGALV DREQDEPLLE ELQARFEFFS HTPNTPARFV DGATQPGGEA KRLILDRANY YATTGGHGAC RGCGEVTAIR LVTATNHALH DKRRKDHTRE LEALIGELTA KRDAVAAKGD DAPRVARLDR TLKTLEKRLY LYESGPTGNG PAGMVIANAT GCSSVYASTF PFNPYTDPWV NSLFQDTPAV AKGIFEGLTA TASEDFAALR IARLELQDAY NPAKHDNQFR YFGWASFTPE ERALLPTVLS MGGDGATYDI GFGALSRLLS TATPIKVVVL NTGAYSNTGG QTSTASLTGQ DSDLSRFGVA NTGKQESRKE LGLIASFHPN VFVVQTSTAL QGHFLKNVLE YLNYSDSPAV LDVYTPCQAE HGIGDAVANR QARKAVESRM NPVFVHDPRR GSNLHSAFSL DGNPEPDQDW AAQSIEYVDD NGATQLLKTA VTPADFAYTE VRFKKQFKKL AADADGVVVQ DYVALSPDQR VGKTPFIYAT DADKRLIKLS VGAAVIRLVE ERRKYWRTLQ FLSGLDVRQI DETHRVELDA LLRQYEDSLK ARETSLDSIA RGMSELAASS NAPAAGGFAG LMAGLAPAAA APATNGAKAP ITSGNVPITI SEDDLAKCTN CKSCYQDVGE VFEPTKIVVD GVTKDVAHVI PGVFGKLKIT PELSAKLSRA AANCDAEIIR
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