Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0703 |
Symbol | |
ID | 3970564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 766832 |
End bp | 769666 |
Gene Length | 2835 bp |
Protein Length | 944 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637923819 |
Product | putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase |
Protein accession | YP_530594 |
Protein GI | 90422224 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases [COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases |
TIGRFAM ID | [TIGR01316] glutamate synthase (NADPH), homotetrameric |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCA TCACCGGCGC GGTCCCCAAC GAGCTGCTGC GCTACGAACA GGCGCGCAGC ACGCTCGAAA CCACCCGCAG CGAGCTCGAA GAGCTGCAGC ATAGCGAAGC GGTCAGCGTG TTTCAGAAGC AGATCGCGCT GTTGCAGAAG CGGCTCTTGA ACGATCCGGC GTCGCTGCGC GACATGTTCA TCAATGACGG CACCCAGGCG ATCGTCTGGG AATTCCAGCA GCCGGCGCTG GGGCTCGGTT TCACCGTGAC GATGTGGGAC TTGTTGAAGC GCGGCGACGA CATGAGCACG ATCCTGCAGC GCTTCATCTG GGCGCTGCCG TTGAAGTTCA AGCGCAAGTT CATCAAGGCG ATCGATAGCC ATCTGTCGGA CAGCTACCCG ATGTTCCGCG GGCTGTCGGA AGGCTGGCCC GGCGAGAACT TCATTCCGCC CTATATCCGC CCGGCGGAAG AGCGGATGTT CGACTTCGAT CTCGTGAACC AGGGCTATCT CGGCTACACC AGCCTCGGCT ACAGCGTCCG CGAGGTCGAA CTGTTCGTCT GGCTGGAAGT GCTGCGCGAC AAGCAGTGCG ACGACAAGCC CTGCGAAATC GGCCTATTGA TCGCCGGCAA GAGCGAGCCG AAGGGCGGCT GCCCGGTCAA GATTCACATT CCGGAAATGC TCGACCTGCT CGGCACCGGC CGCCACCGCG AGGCGCTGGA GCTGATCGAA AGCTGCAACC CGCTGCCCAA CGTGACGGGG CGGGTCTGTC CGCAGGAATT GCAGTGCCAG GGCGTCTGCA CCCACACCAA GCGGCCGATC GAGATCGGCC AGCTGGAATG GTACCTGCCG CAGCACGACA AGCTGGTGAA CCCGGACGCC AACCAGCGCT TCGCCGGCAT GCTCAGCCCG TGGGCGGCGG CGACCAAGCC GCCGATCGCG GTGGTCGGCT CCGGCCCCGC AGGCCTGATC AACGCTTATC TGCTCGCCGC GGAAGGCTTC CCGGTCACGG TGTTCGAGGC GTTCCACGAC CTCGGCGGCG TGCTGCGCTA CGGCATTCCC GAGTTCAGAT TGCCGAATTC GCTGATCGAC GACGTGGTGG AGAAGATCAC GCTGCTCGGC GGCCGCTTCG TGCGCAACTT CGTGGTCGGC AAGACCGCGA CGCTGGAAGA TCTCAAAGCC GCCGGCTTCT GGAAAGTATT TCTCGGTACC GGCGCCGGTC TGCCGACCTT CATGAACGTG CCCGGCGAAC ATCTGTTGGG CGTGATGTCG GCCAACGAGT TCCTGACCCG CGTCAACCTG ATGCGCGGGC TCGACGACAA GTACGAGACC CCGTTGCCGG AGATCCGCGG CAAAGAGGTG TTCGTGATCG GCGGCGGCAA CACCGCGATG GACGCGGCCC GCACCGCCAA ACGGCTCGGC GGCAACGTCA CCATCGTGTA TCGCCGCACC CAGAAGGAAA TGCCGGCGCG CGTCGAGGAA CTGCATCACG CGCTGGAAGA AGGCATCAAC CTCGCGGTGC TGCGCGGCCC GAGTGAATTC ATCGGCGACG GCAAGACCAA CTTCGTCACC CACGCGGTGC TCGACGTCAA CGAACTCGGC GCCCCGGACA AGTCCGGCCG CCGCAGCCCG ACGCCGACCG GCAAGGTCGA ACGGGTGCCG GTCGATCTCG TCATCATGGC GCTCGGCAAC ACCGCCAACC CGATCATGAA GGACGCCGAG CCCGAGCTGA AGACCAATAA ATGGGGCACC ATCGAGGTCG AGCGGAACTC GCAGCGCACC TCGATCAAGG ACGTCTATTG CGGCGGCGAC GCCGCGCGCG GCGGCTCCAC GGCGATCCGT GCGGCCGGCG ACGGCCAGGC CGCGGCGAAG GAAATCGTCG GCGAGATTCC GTTCTCCTCC GCCGAGATCA CCACCATGGT GGCCAATGCG GCGCGCTACA CCGAACTCGG CCAGATGAAG CCGACCATCG TCGACAAGAT CGAACTGGCC GGCGGCATCG TCGAATTCGT GGTGCGCTCG CCGATGGTGG CGAAGGCGGC GCAGGCGGGA CAATTCGTCC GGGTGCTGCC GTGGGACAAG GGCGAGCTGA TCCCGCTGAC GCTGGCGGAT TGGGATGTCG AGGCCGGCAC TATCGATCTG GTGGTGCAAG GCATGGGCAC CTCGTCCTTG GAAATCAACC GGATGGCGAT CGGCGACGCG TTCTCCGGCA TCGCCGGTCC GCTCGGCCGC GCCTCGGAGC TGCATCGCTA CGAGGGCAAC CAGACGGTAG TGTTCACTGC CGGCGGCGTC GGTCTGCCGC CGGTCTATCC GATCATGCGG GCGCATCTGA AGCTCGGCAA TCACGTCACG CTGATCTCCG GCTTCCGCGC CAAGGACTTC CTGTTCTGGA CCGGCGAGCA GGAGCGGGTC GGCAAATTGC AGGCCGAGTT CGGCGATCAG CTCGAGGTGA CCTACACCAC CAATGACGGC AGCTTCGGCG TCAAGGGCTT CGTCTCCGGA CCGCTCGAGG AGATGCTGAA GGCCAACCAA GCAGGCAAGG GCCGCACCAT CGCCGAAGTG ATCGCGATCG GACCGCCGCT GATGATGCGG GCGATCAGTG ACCTCACCAA GCCTTATGGG GTGAAGACCG TGGCGAGCCT CAACTCGATC ATGGTCGATG CCACCGGGAT GTGCGGCGCC TGCATGGTGC CGGTGACCAT CGACGGTAAG ATGGTCCGCA AGCACGCCTG CATCGATGGT CCCGAACTCG ACGCCCACAT CATCGATTGG GACAAATTCC TGCCGCGCTT CAATCAGTTC AAGGCCCAGG AGCTGGACAG CAAGAAGAAG CACGGCTTCG CCTGA
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Protein sequence | MSGITGAVPN ELLRYEQARS TLETTRSELE ELQHSEAVSV FQKQIALLQK RLLNDPASLR DMFINDGTQA IVWEFQQPAL GLGFTVTMWD LLKRGDDMST ILQRFIWALP LKFKRKFIKA IDSHLSDSYP MFRGLSEGWP GENFIPPYIR PAEERMFDFD LVNQGYLGYT SLGYSVREVE LFVWLEVLRD KQCDDKPCEI GLLIAGKSEP KGGCPVKIHI PEMLDLLGTG RHREALELIE SCNPLPNVTG RVCPQELQCQ GVCTHTKRPI EIGQLEWYLP QHDKLVNPDA NQRFAGMLSP WAAATKPPIA VVGSGPAGLI NAYLLAAEGF PVTVFEAFHD LGGVLRYGIP EFRLPNSLID DVVEKITLLG GRFVRNFVVG KTATLEDLKA AGFWKVFLGT GAGLPTFMNV PGEHLLGVMS ANEFLTRVNL MRGLDDKYET PLPEIRGKEV FVIGGGNTAM DAARTAKRLG GNVTIVYRRT QKEMPARVEE LHHALEEGIN LAVLRGPSEF IGDGKTNFVT HAVLDVNELG APDKSGRRSP TPTGKVERVP VDLVIMALGN TANPIMKDAE PELKTNKWGT IEVERNSQRT SIKDVYCGGD AARGGSTAIR AAGDGQAAAK EIVGEIPFSS AEITTMVANA ARYTELGQMK PTIVDKIELA GGIVEFVVRS PMVAKAAQAG QFVRVLPWDK GELIPLTLAD WDVEAGTIDL VVQGMGTSSL EINRMAIGDA FSGIAGPLGR ASELHRYEGN QTVVFTAGGV GLPPVYPIMR AHLKLGNHVT LISGFRAKDF LFWTGEQERV GKLQAEFGDQ LEVTYTTNDG SFGVKGFVSG PLEEMLKANQ AGKGRTIAEV IAIGPPLMMR AISDLTKPYG VKTVASLNSI MVDATGMCGA CMVPVTIDGK MVRKHACIDG PELDAHIIDW DKFLPRFNQF KAQELDSKKK HGFA
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