Gene RPC_0683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0683 
Symbol 
ID3970583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp744968 
End bp746302 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content65% 
IMG OID637923799 
Productphenylacetate-CoA ligase 
Protein accessionYP_530574 
Protein GI90422204 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1541] Coenzyme F390 synthetase 
TIGRFAM ID[TIGR02155] phenylacetate-CoA ligase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGAAA TTCCTCTGCG CAAACTAAGT CAGCTCGCTC CCGAACCAGC CACGCTCGAT 
CACTACGAGC GCGCCTCGCT GGACGAGCTG CGCGCCTGGC AGCTCACGCA ACTACGCTGG
TCGCTGCGCC ACGCCTACGC CAACGTGCCG CATTATCGCA AGAAATTCGA CGCCGCCGGC
GTGCATCCCG ACGATCTGAC CTCGCTCGAT GATCTGGCGA AATTTCCGTT CACCACCAAG
GCCGATCTGC GCGACAACTA TCCCTACGGC ATGTTCGCAG TGCCGGAGCA CGAGGTGGCG
CGGGTGCACG CCTCGTCGGG CACCACCGGC AAGCCGACCG TGGTCGGCTA CACCAAGGGC
GACATCGAGA TCTGGGCCGA CGTGGTGGCG CGCTCGATCC GCGCCGCTGG CGGCCGCCCC
GGCATGAAGC TGCACAACGC CTATGGCTAC GGCCTGTTCA CCGGCGGGCT CGGCGCGCAT
TACGGCGCCG AGAAGCTCGG CTGCATGGTG ATCCCGGTGT CCGGCGGCAT GACCGAGCGG
CAGGTGCAGC TGATCACCGA CTTCAAGCCC GACATCATCA TGGTGACGCC GTCCTACATG
CTGGCGATCC TCGACGAATT CCGCCGCCAG GGGATCGACC CGCGCAAGTC CTCGCTGAAA
GTCGGCATCT TCGGCGCCGA GCCTTGGACC AACGCGATGC GCGAGGAAAT CGAGCAGACC
TTCGATCTGC ACGCCGTTGA TATCTACGGC CTGTCCGAAG TGATCGGGCC GGGCGTCGCC
TCGGAATGCG TGGAGACCAA GGACGGGCTG CACGTCTGGG AAGACCATTT CTATCCCGAG
ATCATCGATC CCGATTCCGG GAAAGTGTTG CCGGACGGCG AGCAGGGCGA GCTGGTGTTC
ACCTCGCTGA CCAAGCAGGC GATGCCGGTG GTGCGCTATC GCACCCGCGA CCTGACGCGG
CTATTGCCCG GCACCGCGCG GTCGATGCGG CGGATGGAGA AAGTCACCGG CCGCACCGAC
GACATGATCA TCCTGCGCGG CGTCAATCTG TTTCCCAGCC AGATCGAGGA GAAGCTGCTG
ACCATCGCGG CGCTGTCGAT GCACTATCAG CTGGTGCTGA CCCGGACGGG CCGGATGGAC
GAGCTCGAGG TTCACGTCGA GGCGCGGCCG GATGCGGCGG CGAGCGAGCT GCGCGAGGCC
GCAGCCAATC GGCTCGAGCT GGCGATCAAA CACACCATCG GCATCACCAC GCGGGTGATC
ATCCGCGATC CCGACAGCAT CGAACGCTCG GCCGGCAAGG CCAAGCGCAT CGTCGACCGT
CGGCCGTCGG CCTAG
 
Protein sequence
MVEIPLRKLS QLAPEPATLD HYERASLDEL RAWQLTQLRW SLRHAYANVP HYRKKFDAAG 
VHPDDLTSLD DLAKFPFTTK ADLRDNYPYG MFAVPEHEVA RVHASSGTTG KPTVVGYTKG
DIEIWADVVA RSIRAAGGRP GMKLHNAYGY GLFTGGLGAH YGAEKLGCMV IPVSGGMTER
QVQLITDFKP DIIMVTPSYM LAILDEFRRQ GIDPRKSSLK VGIFGAEPWT NAMREEIEQT
FDLHAVDIYG LSEVIGPGVA SECVETKDGL HVWEDHFYPE IIDPDSGKVL PDGEQGELVF
TSLTKQAMPV VRYRTRDLTR LLPGTARSMR RMEKVTGRTD DMIILRGVNL FPSQIEEKLL
TIAALSMHYQ LVLTRTGRMD ELEVHVEARP DAAASELREA AANRLELAIK HTIGITTRVI
IRDPDSIERS AGKAKRIVDR RPSA