| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0677 |
|---|
| Symbol | |
|---|
| ID | 3970616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 739448 |
|---|
| End bp | 740230 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637923793 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_530568 |
|---|
| Protein GI | 90422198 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.888321 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCC TCAGGGCCAG CGACATCGGC ATCTCGTTCG GCGGCGTCAA GGCGATTGAT
GGCGTCGGCT TCGCGGTTGC AGCGGGCCAG ATCTTTTCCA TCATCGGCCC GAACGGTGCC
GGCAAGACCA CGCTGTTCAA CGTGATTTCC GGGATGTATC GGCCAAGCCA CGGCCGCGTC
GAACTCGATG GGCGCGACGT CACCGACTTG GCGCCCGACG CACTGGCGGC GCGCGGGCTG
TCGCGCACCT TCCAGAACCT GCAGATCTTC CAGCGCATGA CCGCGGCCGA GAACGTCATG
GTCGGCCGCC ATCTGCAGGA GCGCTGCAAC CTGTTCGCCG ACCTGTTGCG TTTGCCCTCG
GTGACGCGGC AGAACCGGAC GACGCGCGAG GCCGCGTTGG GCTTTCTCGA TCAAGTCGGA
TTGCGCGACA GCGCCGACGT GCTCGCCGGC TCATTGTCCT ATGGCGCCTG CAAGCGGCTG
GAGATCGCGC GCGCACTCGC GGCCGAGCCG CGGGTGCTGC TGCTCGACGA GCCCGCCGCC
GGCTGCAACG CGGTGGAGAC CGAGGAGATC GACAAATTGA TCTGCCGCGT CGCCGCGCAA
GGCATCGCGG TGGTGCTGGT CGAGCACGAC ATGAAACTGG TGATGAAGAT CTCGCATCGC
ATCCTGGTGC TGGTGCAAGG CCGGCCGTTG ATCGAGGGCA ATCCGCAGGA GGTGCGCGAC
AATCCGGCGG TGCTGGAAGC CTATCTCGGC AAGCACGGCG CGCGGGAGGC CGCGCGTGCT
TGA
|
|---|
| Protein sequence | MTILRASDIG ISFGGVKAID GVGFAVAAGQ IFSIIGPNGA GKTTLFNVIS GMYRPSHGRV
ELDGRDVTDL APDALAARGL SRTFQNLQIF QRMTAAENVM VGRHLQERCN LFADLLRLPS
VTRQNRTTRE AALGFLDQVG LRDSADVLAG SLSYGACKRL EIARALAAEP RVLLLDEPAA
GCNAVETEEI DKLICRVAAQ GIAVVLVEHD MKLVMKISHR ILVLVQGRPL IEGNPQEVRD
NPAVLEAYLG KHGAREAARA
|
|---|
| |