Gene RPC_0636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0636 
Symbol 
ID3970671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp688336 
End bp689505 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content65% 
IMG OID637923753 
ProductAcetyl-CoA C-acetyltransferase 
Protein accessionYP_530528 
Protein GI90422158 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGACG CCGTCATCAT TTCCGCCGTG CGCACGCCTG TCGGGCGTTG TCGTGGCGCG 
CTGGCCTCCG TCCCCGCCCA TGTGCTCGCC GCTGCGGCGA TCCGCGAGGC GGTGAGGCGG
GCCGAAATCG ACCCCGAGCG CATCGACGAT GTCGTGTTCG CCAACCTGAT GAACAACGAG
ATCAATAACA TGGGCCGCAT GGCGGCGCTC GAGGCTGGTC TGCCGGTTTC GGTCGGCGGC
ATCACGCTCG ATCGCCAATG CGCGGCCTCG CTCAACGCGC TGGCTTATGG CGCAATGCAG
ATCATGGCGG GCTTTGCCGA TGTGATCGTC GCCGGCGGCG TCGAGAGCGA CAGCCGCCGC
ACTTACTCGA TGGAGAAGAG CGAGATCGCA TACTCGGTCG CACCACCGAA GTGGGTCGAC
ATTCATACGA GTCCCGACAG CATCGGCAAC CCGCCCATGG GCATCACGGC GGAGAATGTC
GCCGAACGCT GGAAGCTGAC GCGACAGGAA CTCGACGAAT TTTCGGTGCG CAGCCATGTG
CTCGCGAGCG CCGCCTGGGA AGCCGGCCGC TTCCAGGACG AAGTCGTGCC GATCGAGGTG
AAGGGTCCGA AGGGTAAGAA AACCGTGGTC GACCGCGACG AGTCGGTGCG CCCGGATTGC
ACACTCGAGT CGCTATCCGG CTTGCGCGCG GTGTTCAAAC CCAATGGCGT CGTTACGGCG
GGCAATTCGT CGCCAATGTC GGACGGCGGC GGCGCGATCG TGATCGTCGA CCGAGACACC
GCCACGAGCC TCGGCGTCGA ACCATTGGCG ATGTTCCGCG GTTATGCCGT CGCTGGCGTC
GATCCCAACG TGATGGGTAT CGGCCCGATC GCTGCGACGG CGAAGCTGCT CAAGCAGACC
GGGCTCAAGG TCGCCGACAT CGATCTTTGG GAGCTCAACG AAGCCTTCGC GTCACAAGCG
CTGGCCTGCA TCCGCGAGAT CGGCATGGAC CTCGACAAGG TTAACCCGAA TGGCGGTGCG
ATCGCTATCG GCCATCCGCT GGCGGGTTCT GGCGCCGTGT TGGTTGCGCG CACCGTGCGC
GAACTGAAGC GCCGCGATCT GCATCGCGCC GTTGTCACCT TCTGCGTTGG CGGCGGCCAG
GGCGTCGCCG TGCTGCTTGA GAGGAACTGA
 
Protein sequence
MRDAVIISAV RTPVGRCRGA LASVPAHVLA AAAIREAVRR AEIDPERIDD VVFANLMNNE 
INNMGRMAAL EAGLPVSVGG ITLDRQCAAS LNALAYGAMQ IMAGFADVIV AGGVESDSRR
TYSMEKSEIA YSVAPPKWVD IHTSPDSIGN PPMGITAENV AERWKLTRQE LDEFSVRSHV
LASAAWEAGR FQDEVVPIEV KGPKGKKTVV DRDESVRPDC TLESLSGLRA VFKPNGVVTA
GNSSPMSDGG GAIVIVDRDT ATSLGVEPLA MFRGYAVAGV DPNVMGIGPI AATAKLLKQT
GLKVADIDLW ELNEAFASQA LACIREIGMD LDKVNPNGGA IAIGHPLAGS GAVLVARTVR
ELKRRDLHRA VVTFCVGGGQ GVAVLLERN