Gene RPC_0624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0624 
Symbol 
ID3970695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp673690 
End bp674076 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content68% 
IMG OID637923740 
ProductLrgA 
Protein accessionYP_530516 
Protein GI90422146 
COG category[R] General function prediction only 
COG ID[COG1380] Putative effector of murein hydrolase LrgA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.938941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCAA GTCTCGGCCT GATCCTGCTG TGCCAATTGG CCGGCGAGGT GCTGGTGCGT 
GGCCTCGGGC TGGCGCTGCC GGGTCCGGTG GTCGGGCTGT TGCTGCTGCT GACGCTGCTG
CTGGCGCGCG ACAAGCTGTC GCTGCTCGAG GTCGGGCCGC TGCGCAATGA CGGTGTCGAA
AAAGCCGCCA AGGTGCTGCT CGCCAACATG TCGCTGATGT TCGTGCCGGC CGGGGTCGGC
GTGGTGCAGA AACTCGACCT GATCGGCGAA CACGGCCTCG CGATCGCCGG CGTGCTGATC
GGCTCGGTGA TCATCACGCT GTTGGTGACG GTCGCGACCT TCGTGGTCTC GGCGCGGCTG
GTGGCGCGCT GGCGAGGTTC GCGGTGA
 
Protein sequence
MIASLGLILL CQLAGEVLVR GLGLALPGPV VGLLLLLTLL LARDKLSLLE VGPLRNDGVE 
KAAKVLLANM SLMFVPAGVG VVQKLDLIGE HGLAIAGVLI GSVIITLLVT VATFVVSARL
VARWRGSR