Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0624 |
Symbol | |
ID | 3970695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 673690 |
End bp | 674076 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637923740 |
Product | LrgA |
Protein accession | YP_530516 |
Protein GI | 90422146 |
COG category | [R] General function prediction only |
COG ID | [COG1380] Putative effector of murein hydrolase LrgA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.938941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCAA GTCTCGGCCT GATCCTGCTG TGCCAATTGG CCGGCGAGGT GCTGGTGCGT GGCCTCGGGC TGGCGCTGCC GGGTCCGGTG GTCGGGCTGT TGCTGCTGCT GACGCTGCTG CTGGCGCGCG ACAAGCTGTC GCTGCTCGAG GTCGGGCCGC TGCGCAATGA CGGTGTCGAA AAAGCCGCCA AGGTGCTGCT CGCCAACATG TCGCTGATGT TCGTGCCGGC CGGGGTCGGC GTGGTGCAGA AACTCGACCT GATCGGCGAA CACGGCCTCG CGATCGCCGG CGTGCTGATC GGCTCGGTGA TCATCACGCT GTTGGTGACG GTCGCGACCT TCGTGGTCTC GGCGCGGCTG GTGGCGCGCT GGCGAGGTTC GCGGTGA
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Protein sequence | MIASLGLILL CQLAGEVLVR GLGLALPGPV VGLLLLLTLL LARDKLSLLE VGPLRNDGVE KAAKVLLANM SLMFVPAGVG VVQKLDLIGE HGLAIAGVLI GSVIITLLVT VATFVVSARL VARWRGSR
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