| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0623 |
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| Symbol | |
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| ID | 3970694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 672968 |
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| End bp | 673693 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637923739 |
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| Product | LrgB-like protein |
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| Protein accession | YP_530515 |
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| Protein GI | 90422145 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1346] Putative effector of murein hydrolase |
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| TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGATCGACA ATCCGTTCGC GCTATGGGTG TATCTGTCGC AAAGCCCGTT GCTGTGGCTG
ACCACCACGC TGGTGGTCTA TGCCATGACC GACGCGGTGT CGCAGGCCAG CCGCCGCAAT
CCGCTGGCCA ACCCGGTGCT GCACGCGATG TGGGTGATCG GCATCTTCCT GTGGCTGACC
GGCACCTCGT ATCAGACCTA TTTCGAGGGC GCGCAGTTCG TGCATTTCCT GCTCGGGCCG
GTGACGGTGG CGCTGGCGGT GCCGCTGTAC GAGAACCGCA ACGCGGTGAT GGCGGCGATC
GTGCCGATGC TGCTGGCGCT GGTGGTCGGC AGCGTCACCG CGATCGGCTC GGTGGTGGGG
CTCGCCAAGG CTTTCGGACT GCCGGACATC GTGATGCTGT CGATGACGCC GAAATCGGTG
ACCGCGCCGG TGGCGATGGG CATTGCCGAA TCGATCCACG CCGATCCCTC GCTCGCCGCG
GTGGCGGTGA TCCTCACCGG GATCATCGGC GCGATCATCG TCACGCCGCT GATGAACCTG
GTGAAGGTCA CCGATTTCCG CGCCCGCGGC TTCGCCGTGG GGCTCGCCTC GCACGGCATC
GGCACCGCGC AAGCCTTCCA AATCAATCCG GTGGCCGGCG CCTTCGCCGG CATCGCCATG
AGCCTGAACG CGCTGTTGAC CTCGCTGCTG GTGCCGCTGG CGGCGACGTT GCTGTTTCAT
GGTTGA
|
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| Protein sequence | MIDNPFALWV YLSQSPLLWL TTTLVVYAMT DAVSQASRRN PLANPVLHAM WVIGIFLWLT
GTSYQTYFEG AQFVHFLLGP VTVALAVPLY ENRNAVMAAI VPMLLALVVG SVTAIGSVVG
LAKAFGLPDI VMLSMTPKSV TAPVAMGIAE SIHADPSLAA VAVILTGIIG AIIVTPLMNL
VKVTDFRARG FAVGLASHGI GTAQAFQINP VAGAFAGIAM SLNALLTSLL VPLAATLLFH
G
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