| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0550 |
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| Symbol | |
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| ID | 3970791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 597051 |
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| End bp | 598562 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637923666 |
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| Product | peptidase M48, Ste24p |
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| Protein accession | YP_530444 |
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| Protein GI | 90422074 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4784] Putative Zn-dependent protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGGCTA CCGAAGAAAG ACACGATGTG ACGGGTGTGG AACGGCGCGA GACCGGCTTG
AGCCGCCGCC TTTGGGCTGC GTCGGCATTG CTGTGCGCGG GGCTGCTGCT CAGCGCCTGC
GGCGACGCCG GCCGTTTCCA GGTCGCAACG CCGCAGGCGA GTCCCGCCAA GCCGCCGCGT
GCCGCGCAGC AGAATCCGGC GGCGGAGCGC GAACACGAGC GTATCCTGTC GTCCTATGGC
GGCGCCTATG ACGATCCGAA GCTGGAAGCA CTGATCACCA AGACGGTGGA CCGTCTGGTG
GCGGCGTCCG ATCGTCCGGA CCTGTCCTAC AAGGTGACGA TCCTGAATTC CGGCGCGGTC
AACGCCTTCG CGCTGCCGAC CGGACAGCTC TACGTCACCC GCGGGCTGAT CGCGCTGGCC
AGCGATACGT CGGAGTTGTC CTCGGTGCTA TCGCACGAGA TGGCGCATGT GCTGGCCAAG
CACGCCTCGA TCCGCGAGGA CCAGGCGCGG CAGGCGGCAA TCGTCACCCG CGTCGTTACC
GACATGGGCA GCGACCCCGA CCTTACCGCG CTGGCGCTGG CGAAGACCAA GCTGACGATG
GCGAGTTTTT CGCGGGCGCA GGAATTCGAA GCCGACGGCA TCGGCGTCGG GATTTCGGCG
CGGGCGCAAT TCGATCCCTA CGGCGCCGCA CGGTTTCTGA GTTCGATGGA GCGCAATGCC
GCGTTGAAGG CCAGCCGCGC CTCGGCCGAT CCGCGTTCTC AGGACTTCCT GTCGTCGCAT
CCGGCAACGC CCGAGCGGGT GCAGAACGCG CAGGCCAATG CCCGGCAATA TTCCTCGCCC
GACGGCGGCG AGCGCGACCG CGAGAGCTAT CTCGCGACCA TCGACGGCAT GGTCTACGGC
GAAGACCCCA GCGAAGGCTT CGTGCGCGGC CGCCGCTTCC TGCATCCCAA GCTCGGCTTC
ACCTTCACCG CGCCGGAAGC CTTCACGCTG GACAACACCG CGCAGGCGGT GATCGGCGTG
CGCGAGGGCG GCAACCAGGC GATGCGGTTC GACGTGGTGC GGGTCGCCTC AGAGCAGACG
CTCGCCGAAT ATCTCAATTC CGGCTGGATG GAAAACGTCG ACAAGGCCTC CACCGAGGAA
ATGACCATCA ACGGCTTGCC GGCGGCGGCC GCGGTGGCGC ATGGCGATCA GTGGCAGTTC
CGGGTCTACG CGCTGCGGTT CGGCAGCGAC GTCTACCGCT TCATCTTCGC CGCCAAACAG
AAGACCACCG AGAGCGAACG CAACGCCCGC GAAACCGTGG GCTCGTTCCG CCGGCTGACG
CTGGAGGAAA TCCAGGCGGC GCGGCCGCTG CGCATCAAGA TCATCACCGC GCAGCCTGGC
GACACCGTGG AATCGCTGTC GCACCGGATG TCCGGCGTCG ACAAGCCGGC GGAGCGGTTT
CGCGTGCTCA ACGGGCTTGA TGCCCATGCC GAGGTCAAGG TCCGCGACCG CGTCAAGATC
GTGGTGGATT GA
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| Protein sequence | MGATEERHDV TGVERRETGL SRRLWAASAL LCAGLLLSAC GDAGRFQVAT PQASPAKPPR
AAQQNPAAER EHERILSSYG GAYDDPKLEA LITKTVDRLV AASDRPDLSY KVTILNSGAV
NAFALPTGQL YVTRGLIALA SDTSELSSVL SHEMAHVLAK HASIREDQAR QAAIVTRVVT
DMGSDPDLTA LALAKTKLTM ASFSRAQEFE ADGIGVGISA RAQFDPYGAA RFLSSMERNA
ALKASRASAD PRSQDFLSSH PATPERVQNA QANARQYSSP DGGERDRESY LATIDGMVYG
EDPSEGFVRG RRFLHPKLGF TFTAPEAFTL DNTAQAVIGV REGGNQAMRF DVVRVASEQT
LAEYLNSGWM ENVDKASTEE MTINGLPAAA AVAHGDQWQF RVYALRFGSD VYRFIFAAKQ
KTTESERNAR ETVGSFRRLT LEEIQAARPL RIKIITAQPG DTVESLSHRM SGVDKPAERF
RVLNGLDAHA EVKVRDRVKI VVD
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