Gene RPC_0547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0547 
Symbol 
ID3970788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp594615 
End bp594953 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content57% 
IMG OID637923663 
Product4Fe-4S ferredoxin, iron-sulfur binding 
Protein accessionYP_530441 
Protein GI90422071 
COG category[C] Energy production and conversion 
COG ID[COG1146] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.644294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTACG TCGTCACTGA AGCCTGCATC AAATGCAAAT ACACAGACTG CGTCGAAGTC 
TGCCCCGTGG ATTGTTTCTA CGAAGGCGAC AACATGCTGG TCATCCATCC TGACGAGTGC
ATCGACTGCG GCGTTTGCGA GCCCGAATGC CCCGCGGATG CGATCAAGCC GGACACCGAG
CCGGGCTTGG AGAAGTGGCT CGAAGTCAAC GCCGAATATT CCAAGACCTG GCCCAACATC
ACCCAGAAAA AGGACGCGCC CGCCGACGCC AAGGAATTCG AAAGCGTGGA AGGCAAGTTC
GACAAGTACT TCTCGGCGGA GCCCGGAACC GGCGATTGA
 
Protein sequence
MTYVVTEACI KCKYTDCVEV CPVDCFYEGD NMLVIHPDEC IDCGVCEPEC PADAIKPDTE 
PGLEKWLEVN AEYSKTWPNI TQKKDAPADA KEFESVEGKF DKYFSAEPGT GD