Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0530 |
Symbol | |
ID | 3970810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 573786 |
End bp | 574748 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637923646 |
Product | tyrosine recombinase XerD |
Protein accession | YP_530424 |
Protein GI | 90422054 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.931339 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0955198 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCCCG GAAAAAACTC CGACGCCCGG CTGATCGAGC TGTTCCTCGA CATGATCGCC GCCGAACAGG GCGCCGGCAA GAACACGCTC GACGCCTATC GTGGCGACCT CACCGACCTG TCGGACTTCC TCGGCCACGC CAGGTCGAGC TTCGTTGCCG CCGACACCGA GGTGCTGCGC GGCTATCTCG CCGAGCTCGA CGAGCGCGGC TACAAATCGA CCAGCGTGGC GCGCAAGCTG TCGGCGTTCC GGCATCTGTT TCGCTTTCTT TTGACCGAGC GGATCCGCGC CGACGATCCG GCCGCGATCC TGTCCGGGCC GAAGCGCGGC CGCGGCCTGC CGAAAGTGCT GTCGATCGCC GACGTCGACC GGCTGTTGCA GCACGCCAAG GATCTGATCG CGGCGCCGCA CGCCAACACC CAGCAGCGGC TGCGCGCGGC GCGGCTGTAT TGCCTGCTCG AGGTACTGTA CGCGACCGGA CTGCGGGTCT CCGAGCTGGT GTCGCTGCCG TTGTCGGCGG CGCGGCGCGA CGCCCGCATG ATCGTGGTGC GCGGCAAAGG CAACAAGGAG CGGCTGGTGC CGCTCAACGA ATCCTCCAAG CAGGCGATGG CCGGCTATCT CGCCGCACTC GATGAGCTGC GACAAGAAAA GGCCAAGAAC GCTAGCGCCT CGAAATGGTT GTTTCCGTCG TTCGGCGAGA GCGGCCATTT GACAAGGCAG CATTTCGCCC GCGAGCTGAA AGACCTCGCC GGCGCCGCCG GGCTGTCGCC GCGCTTGGTC AGCCCGCACG TGCTGCGCCA CGCCTTCGCC AGCCACCTAC TGCACAACGG CGCCGACCTG CGCATCGTGC AGACCCTGCT CGGTCACACC GATATTTCCA CCACGCAGAT CTACACCCAT GTGGTCGAGG AACGGCTGAA GAGCCTGGTG CGCGATCTGC ACCCGCTGGC TGATAAGCCG TAG
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Protein sequence | MPPGKNSDAR LIELFLDMIA AEQGAGKNTL DAYRGDLTDL SDFLGHARSS FVAADTEVLR GYLAELDERG YKSTSVARKL SAFRHLFRFL LTERIRADDP AAILSGPKRG RGLPKVLSIA DVDRLLQHAK DLIAAPHANT QQRLRAARLY CLLEVLYATG LRVSELVSLP LSAARRDARM IVVRGKGNKE RLVPLNESSK QAMAGYLAAL DELRQEKAKN ASASKWLFPS FGESGHLTRQ HFARELKDLA GAAGLSPRLV SPHVLRHAFA SHLLHNGADL RIVQTLLGHT DISTTQIYTH VVEERLKSLV RDLHPLADKP
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