Gene RPC_0529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0529 
Symbol 
ID3970809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp573028 
End bp573675 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content71% 
IMG OID637923645 
ProductPadR-like family transcriptional regulator 
Protein accessionYP_530423 
Protein GI90422053 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.85519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0848378 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGGAT TTCATCACGA CCGCCACGCT CAGGGCCGCC CCGGCCGCGG CGAAGGATCT 
CACCATCACC ACGCCGGCCA CGGCGAGGGA TTTCCCCATC ACCACGCCGG CCCGCGCGGC
GGCGGCCGGT TCGGACGCGG CCCTGATGCC GAGGACTTCC AGGGCGACGA CCGCGGACAC
GGCGGCGGGC GCCGGCGCCG GTTCGACGGC GCCGAGCTGC GGCTGGTGCT GTTGAAGCTG
ATCGCCGACA AGCCGCGGCA CGGCTACGAC CTGATCCGCG CGGTCGAAGA ACTGACCGGT
GGCGCCTACG CGCCGAGCCC CGGCATCGTC TATCCGACGC TGACGCTGCT CAGCGACATG
GGGTTGATCG CCGAGCAATC GGCCGAGGGC GCCCGCAAGC AGTTCGCCGT CACGCCTGAA
GGCACCGCGC ATCTCGCCGA ACAGGCGACC GAGGTCGCCG CCATGCTGGC GCGGCTCGAA
GCGCTCGGCG CGATGCGCGA GCGGGTCGAC GCGGTGCCGG TGCGCCGCGC CATGCACAAT
CTGCGCAGCG TGCTGCAGCA TCGGCTCGGC GAAGGGCTGG ACAAGGAGCG GCTGCAAGCG
GCCGTGGCGC TGATCGACGA GGCGGCGCAA AAGATCGAAC GGCTGTGA
 
Protein sequence
MFGFHHDRHA QGRPGRGEGS HHHHAGHGEG FPHHHAGPRG GGRFGRGPDA EDFQGDDRGH 
GGGRRRRFDG AELRLVLLKL IADKPRHGYD LIRAVEELTG GAYAPSPGIV YPTLTLLSDM
GLIAEQSAEG ARKQFAVTPE GTAHLAEQAT EVAAMLARLE ALGAMRERVD AVPVRRAMHN
LRSVLQHRLG EGLDKERLQA AVALIDEAAQ KIERL