Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0529 |
Symbol | |
ID | 3970809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 573028 |
End bp | 573675 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637923645 |
Product | PadR-like family transcriptional regulator |
Protein accession | YP_530423 |
Protein GI | 90422053 |
COG category | [K] Transcription |
COG ID | [COG1695] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.85519 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0848378 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGGAT TTCATCACGA CCGCCACGCT CAGGGCCGCC CCGGCCGCGG CGAAGGATCT CACCATCACC ACGCCGGCCA CGGCGAGGGA TTTCCCCATC ACCACGCCGG CCCGCGCGGC GGCGGCCGGT TCGGACGCGG CCCTGATGCC GAGGACTTCC AGGGCGACGA CCGCGGACAC GGCGGCGGGC GCCGGCGCCG GTTCGACGGC GCCGAGCTGC GGCTGGTGCT GTTGAAGCTG ATCGCCGACA AGCCGCGGCA CGGCTACGAC CTGATCCGCG CGGTCGAAGA ACTGACCGGT GGCGCCTACG CGCCGAGCCC CGGCATCGTC TATCCGACGC TGACGCTGCT CAGCGACATG GGGTTGATCG CCGAGCAATC GGCCGAGGGC GCCCGCAAGC AGTTCGCCGT CACGCCTGAA GGCACCGCGC ATCTCGCCGA ACAGGCGACC GAGGTCGCCG CCATGCTGGC GCGGCTCGAA GCGCTCGGCG CGATGCGCGA GCGGGTCGAC GCGGTGCCGG TGCGCCGCGC CATGCACAAT CTGCGCAGCG TGCTGCAGCA TCGGCTCGGC GAAGGGCTGG ACAAGGAGCG GCTGCAAGCG GCCGTGGCGC TGATCGACGA GGCGGCGCAA AAGATCGAAC GGCTGTGA
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Protein sequence | MFGFHHDRHA QGRPGRGEGS HHHHAGHGEG FPHHHAGPRG GGRFGRGPDA EDFQGDDRGH GGGRRRRFDG AELRLVLLKL IADKPRHGYD LIRAVEELTG GAYAPSPGIV YPTLTLLSDM GLIAEQSAEG ARKQFAVTPE GTAHLAEQAT EVAAMLARLE ALGAMRERVD AVPVRRAMHN LRSVLQHRLG EGLDKERLQA AVALIDEAAQ KIERL
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